myRT

myRT report for GCA_003444135.1_ASM344413v1

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Seq: DLVH01000036.1 TPA_asm: Planctomycetaceae bacterium isolate UBA9262 contig_108539, whole genome shotgun sequence (4858 bp)
Overview 1 RT 1: 3-4835 bp Neighborhood of RT #1 [3, 4855] KOG3867 DUF1501 RVT-Retrons HTH_17 7tmA_GPR84-like Feature: gene Location: 3-137 bp Feature: domain Description: KOG3867 Location: 24-138 bp Feature: domain Description: KOG3867 Location: 24-1 38 bp Feature: gene Location: 155-1543 bp Feature: domain Description: DUF1501 Location: 326-1535 bp Feature: domain Description: DUF1 501 Location: 326-1 535 bp Feature: gene Location: 1931-2884 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2030-2600 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2030-2600 bp Feature: gene Location: 2918-4198 bp Feature: domain Description: HTH_17 Location: 2945-3077 bp Feature: domain Description: HTH_1 7 Location: 2945-3077 bp Feature: gene Location: 4286-4855 bp Feature: domain Description: 7tmA_GPR84-like Location: 4385-4835 bp Feature: domain Description: 7tmA_GPR84-like Location: 4385-4835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1501 (pfam07394), RVT-Retrons, HTH_17 (pfam12728), KOG3867 (KOG3867, Sulfatase )

Seq: DLVH01000085.1 TPA_asm: Planctomycetaceae bacterium isolate UBA9262 contig_2089, whole genome shotgun sequence (8377 bp)
Overview 1 RT 1: 2-6840 bp Neighborhood of RT #1 [2, 6860] RVT-Retrons RVT-Retrons VCBS VCBS VCBS VCBS VCBS IDH Feature: gene Location: 2-619 bp Feature: gene Location: 718-951 bp Feature: gene Location: 1097-2065 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1196-1766 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1196-1766 bp Feature: gene Location: 2056-3090 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2182-2779 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 182 -2 779 bp Feature: gene Location: 3027-4508 bp Feature: domain Description: VCBS Location: 3357-3423 bp Feature: domain Description: VCBS Location: 3357-342 3 bp Feature: domain Description: VCBS Location: 3456-3585 bp Feature: domain Description: VCBS Location: 3456-3585 bp Feature: domain Description: VCBS Location: 3711-3900 bp Feature: domain Description: VCBS Location: 3711-3900 bp Feature: domain Description: VCBS Location: 3948-4092 bp Feature: domain Description: VCBS Location: 3948-4092 bp Feature: domain Description: VCBS Location: 4245-4425 bp Feature: domain Description: VCBS Location: 42 45-442 5 bp Feature: gene Location: 4623-6860 bp Feature: domain Description: IDH Location: 4644-6840 bp Feature: domain Description: IDH Location: 4644-6840 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, VCBS (pfam13517), IDH (pfam03971)