myRT

myRT report for GCA_003444935.1_ASM344493v1

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Seq: DLWH01000408.1 TPA_asm: Lachnospiraceae bacterium isolate UBA12236 contig_4959, whole genome shotgun sequence (3109 bp)
Overview 1 RT 1: 333-2076 bp Neighborhood of RT #1 [333, 2076] RVT-GII RVT-GII Feature: gene Location: 333-719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 543-705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 543-705 bp Feature: gene Location: 719-1306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 725-1076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 725-1 076 bp Feature: gene Location: 1502-1693 bp Feature: gene Location: 1750-2076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: DLWH01000013.1 TPA_asm: Lachnospiraceae bacterium isolate UBA12236 contig_833, whole genome shotgun sequence (11918 bp)
Overview 1 RT 1: 2-8993 bp Neighborhood of RT #1 [2, 9004] Flg_new Glug Glug Glug Glug Flg_new Flg_new Glug Glug Glug Glug RVT-GII GIIM RhaT M20_Acy1_YxeP-like Feature: gene Location: 2-4696 bp Feature: domain Description: Flg_new Location: 20-113 bp Feature: domain Description: Flg_new Location: 2 0-113 bp Feature: domain Description: Glug Location: 662-716 bp Feature: domain Description: Glug Location: 662 -716 bp Feature: domain Description: Glug Location: 725-797 bp Feature: domain Description: Glug Location: 72 5-797 bp Feature: domain Description: Glug Location: 815-887 bp Feature: domain Description: Glug Location: 815-887 bp Feature: domain Description: Glug Location: 890-983 bp Feature: domain Description: Glug Location: 890-983 bp Feature: domain Description: Flg_new Location: 1817-2000 bp Feature: domain Description: Flg_new Location: 1817-2 000 bp Feature: domain Description: Flg_new Location: 2162-2249 bp Feature: domain Description: Flg_new Location: 2 162 -2 2 49 bp Feature: domain Description: Glug Location: 2648-2705 bp Feature: domain Description: Glug Location: 2 648-2 705 bp Feature: domain Description: Glug Location: 2744-2804 bp Feature: domain Description: Glug Location: 2 744-2 804 bp Feature: domain Description: Glug Location: 3011-3080 bp Feature: domain Description: Glug Location: 3011-3080 bp Feature: domain Description: Glug Location: 3257-3332 bp Feature: domain Description: Glug Location: 32 57-3332 bp Feature: gene Location: 5272-6576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5473-6091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5473-6091 bp Feature: domain Description: GIIM Note: maturase Location: 6187-6355 bp Feature: domain Description: GIIM Note: maturase Location: 6187-6355 bp Feature: gene Location: 6762-7658 bp Feature: domain Description: RhaT Location: 6798-7653 bp Feature: domain Description: RhaT Location: 6798-7653 bp Feature: gene Location: 7865-9004 bp Feature: domain Description: M20_Acy1_YxeP-like Location: 7889-8993 bp Feature: domain Description: M2 0_Acy1_YxeP-like Location: 7889-8993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Flg_new (pfam09479), Glug (pfam07581), RVT-GII, GIIM (pfam08388), RhaT (TIGR00776), M20_Acy1_YxeP-like (cd05669)

Seq: DLWH01000096.1 TPA_asm: Lachnospiraceae bacterium isolate UBA12236 contig_940, whole genome shotgun sequence (6330 bp)
Overview 1 RT 1: 2-6292 bp Neighborhood of RT #1 [2, 6327] Wzy_C RVT-GII RVT-GII group_II_RT_mat Resolvase Recombinase Feature: gene Location: 2-979 bp Feature: domain Description: Wzy_C Location: 332-749 bp Feature: domain Description: Wzy_C Location: 3 3 2-749 bp Feature: gene Location: 1251-1709 bp Feature: gene Location: 2186-3010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2507-2981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2507-2981 bp Feature: gene Location: 4048-4494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4051-4378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4051-43 78 bp Feature: gene Location: 4913-5443 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4916-5240 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4916-5240 bp Feature: gene Location: 5596-6327 bp Feature: domain Description: Resolvase Location: 5674-6034 bp Feature: domain Description: Resolvase Location: 5674-603 4 bp Feature: domain Description: Recombinase Location: 6100-6292 bp Feature: domain Description: Recombinase Location: 6100-6292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Wzy_C (pfam04932), group_II_RT_mat (TIGR04416), Resolvase (smart00857), Recombinase (pfam07508)