myRT

myRT report for GCA_003446165.1_ASM344616v1

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Seq: DMBM01000254.1 TPA_asm: Acinetobacter johnsonii isolate UBA8888 contig_16315, whole genome shotgun sequence (3572 bp)
Overview 1 RT 1: 2-3561 bp Neighborhood of RT #1 [2, 3569] RVT-Retrons valS Feature: gene Location: 2-805 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26-539 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26-539 bp Feature: gene Location: 852-3569 bp Feature: domain Description: valS Location: 855-3561 bp Feature: domain Description: valS Location: 855-3561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, valS (TIGR00422)

Seq: DMBM01000271.1 TPA_asm: Acinetobacter johnsonii isolate UBA8888 contig_3442, whole genome shotgun sequence (15629 bp)
Overview 1 RT 1: 11601-15624 bp Neighborhood of RT #1 [11601, 15626] PRK12335 RVT-UG2 fadA Feature: gene Location: 11601-12533 bp Feature: domain Description: PRK12335 Location: 11673-12528 bp Feature: domain Description: PRK12 335 Location: 11673-12 52 8 bp Feature: gene Location: 12572-12703 bp Feature: gene Location: 12731-14119 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 12968-13769 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 12 968-13769 bp Feature: gene Location: 14526-15626 bp Feature: domain Description: fadA Location: 14529-15624 bp Feature: domain Description: fadA Location: 1452 9-1562 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12335 (tellurite resistance protein TehB; Provisional), RVT-UG2, fadA (TIGR02445)

Seq: DMBM01000216.1 TPA_asm: Acinetobacter johnsonii isolate UBA8888 contig_7010, whole genome shotgun sequence (9876 bp)
Overview 1 RT 1: 1967-9516 bp Neighborhood of RT #1 [1967, 9734] PRK11561 AcrR RVT-UG28 group_II_RT_mat cat_per_HPI RomA-like_MBL-fold Feature: gene Location: 1967-3619 bp Feature: domain Description: PRK11561 Location: 1979-3530 bp Feature: domain Description: PRK11561 Location: 1979-3 53 0 bp Feature: gene Location: 3698-4315 bp Feature: domain Description: AcrR Location: 3728-4097 bp Feature: domain Description: AcrR Location: 3 728-4097 bp Feature: gene Location: 4426-5997 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 4789-5440 bp Feature: RT Description: RVT-UG28 Note: UG28 RT Location: 4789-5440 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5476-5785 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5476-5785 bp Feature: gene Location: 6052-8244 bp Feature: domain Description: cat_per_HPI Location: 6112-8239 bp Feature: domain Description: cat_per_HPI Location: 6112-823 9 bp Feature: gene Location: 8679-9734 bp Feature: domain Description: RomA-like_MBL-fold Location: 8982-9516 bp Feature: domain Description: RomA-like_MBL-fold Location: 8982-9516 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11561 (isovaleryl CoA dehydrogenase; Provisional), AcrR (COG1309), RVT-UG28, group_II_RT_mat (TIGR04416), cat_per_HPI (TIGR00198), RomA-like_MBL-fold (cd16283)