myRT

myRT report for GCA_003449075.1_ASM344907v1

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Seq: MCBB01000005.1 Vibrio cholerae strain VN-2808 NODE_102, whole genome shotgun sequence (4641 bp)
Overview 1 RT 1: 193-3469 bp Neighborhood of RT #1 [193, 3606] RVT_N RVT-GII GIIM AAA_21 Feature: gene Location: 193-1707 bp Feature: RT Description: RVT_N Location: 283-526 bp Feature: RT Description: RVT_N Location: 283-526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571-1198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571 -1 1 98 bp Feature: domain Description: GIIM Note: maturase Location: 1255-1483 bp Feature: domain Description: GIIM Note: maturase Location: 1 255-1 483 bp Feature: gene Location: 2189-2386 bp Feature: gene Location: 2488-3606 bp Feature: domain Description: AAA_21 Location: 2614-3469 bp Feature: domain Description: AAA_21 Location: 261 4-3469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), AAA_21 (pfam13304)

Seq: MCBB01000147.1 Vibrio cholerae strain VN-2808 NODE_30, whole genome shotgun sequence (44638 bp)
Overview 1 RT 1: 41687-44222 bp Neighborhood of RT #1 [41687, 44446] PRK10293 DUF3389 RVT_N RVT-GII GIIM Feature: gene Location: 41687-42274 bp Feature: domain Description: PRK10293 Location: 41831-42230 bp Feature: domain Description: PRK102 93 Location: 41831-42 2 30 bp Feature: gene Location: 42275-42484 bp Feature: domain Description: DUF3389 Location: 42278-42401 bp Feature: domain Description: DUF3389 Location: 42 2 78-42 401 bp Feature: gene Location: 42968-44446 bp Feature: RT Description: RVT_N Location: 43022-43265 bp Feature: RT Description: RVT_N Location: 4302 2 -432 65 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43310-43937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43310-43937 bp Feature: domain Description: GIIM Note: maturase Location: 44000-44222 bp Feature: domain Description: GIIM Note: maturase Location: 44000-442 2 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10293 (1,4-dihydroxy-2-naphthoyl-CoA hydrolase), DUF3389 (pfam11869), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)