myRT

myRT report for GCA_003449115.1_ASM344911v1

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Seq: MCBA01000143.1 Vibrio cholerae strain VN-2825 NODE_29, whole genome shotgun sequence (44419 bp)
Overview 1 RT 1: 41468-44003 bp Neighborhood of RT #1 [41468, 44227] PRK10293 DUF3389 RVT_N RVT-GII GIIM Feature: gene Location: 41468-42055 bp Feature: domain Description: PRK10293 Location: 41612-42011 bp Feature: domain Description: PRK1 0293 Location: 41 61 2-4201 1 bp Feature: gene Location: 42056-42265 bp Feature: domain Description: DUF3389 Location: 42059-42182 bp Feature: domain Description: DUF3389 Location: 42059-421 82 bp Feature: gene Location: 42749-44227 bp Feature: RT Description: RVT_N Location: 42803-43046 bp Feature: RT Description: RVT_N Location: 42803-43046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43091-43718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43091 -4371 8 bp Feature: domain Description: GIIM Note: maturase Location: 43781-44003 bp Feature: domain Description: GIIM Note: maturase Location: 43781 -44003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10293 (1,4-dihydroxy-2-naphthoyl-CoA hydrolase), DUF3389 (pfam11869), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MCBA01000214.1 Vibrio cholerae strain VN-2825 NODE_93, whole genome shotgun sequence (4942 bp)
Overview 1 RT 1: 586-4526 bp Neighborhood of RT #1 [586, 4750] AAA_21 RVT_N RVT-GII GIIM Feature: gene Location: 586-1344 bp Feature: gene Location: 1337-2455 bp Feature: domain Description: AAA_21 Location: 1463-2318 bp Feature: domain Description: AAA_2 1 Location: 1463-2 318 bp Feature: gene Location: 3236-4750 bp Feature: RT Description: RVT_N Location: 3326-3569 bp Feature: RT Description: RVT_N Location: 332 6-3569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3614-4241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3614-42 41 bp Feature: domain Description: GIIM Note: maturase Location: 4298-4526 bp Feature: domain Description: GIIM Note: maturase Location: 42 98-452 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)