myRT

myRT report for GCA_003449135.1_ASM344913v1

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Seq: MCAY01000149.1 Vibrio cholerae strain VN-29-97 NODE_31, whole genome shotgun sequence (44418 bp)
Overview 1 RT 1: 41467-44002 bp Neighborhood of RT #1 [41467, 44226] PRK10293 DUF3389 RVT_N RVT-GII GIIM Feature: gene Location: 41467-42054 bp Feature: domain Description: PRK10293 Location: 41611-42010 bp Feature: domain Description: PRK1 0293 Location: 41 61 1 -4201 0 bp Feature: gene Location: 42055-42264 bp Feature: domain Description: DUF3389 Location: 42058-42181 bp Feature: domain Description: DUF3389 Location: 42058-421 81 bp Feature: gene Location: 42748-44226 bp Feature: RT Description: RVT_N Location: 42802-43045 bp Feature: RT Description: RVT_N Location: 42802-43045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43090-43717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43090-4371 7 bp Feature: domain Description: GIIM Note: maturase Location: 43780-44002 bp Feature: domain Description: GIIM Note: maturase Location: 43780-44002 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10293 (1,4-dihydroxy-2-naphthoyl-CoA hydrolase), DUF3389 (pfam11869), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MCAY01000219.1 Vibrio cholerae strain VN-29-97 NODE_95, whole genome shotgun sequence (4942 bp)
Overview 1 RT 1: 193-3469 bp Neighborhood of RT #1 [193, 3606] RVT_N RVT-GII GIIM AAA_21 Feature: gene Location: 193-1707 bp Feature: RT Description: RVT_N Location: 283-526 bp Feature: RT Description: RVT_N Location: 2 83-52 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571-1198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 571-1198 bp Feature: domain Description: GIIM Note: maturase Location: 1255-1483 bp Feature: domain Description: GIIM Note: maturase Location: 12 55-1483 bp Feature: gene Location: 2189-2386 bp Feature: gene Location: 2488-3606 bp Feature: domain Description: AAA_21 Location: 2614-3469 bp Feature: domain Description: AAA_2 1 Location: 2 614-3469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), AAA_21 (pfam13304)