myRT

myRT report for GCA_003452005.1_ASM345200v1

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Seq: DMIU01000281.1 TPA_asm: Runella sp. isolate UBA8721 contig_178438, whole genome shotgun sequence (4225 bp)
Overview 1 RT 1: 2-3887 bp Neighborhood of RT #1 [2, 3901] RVT-Retrons recD_rel recD_rel WYL Feature: gene Location: 2-1144 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 206-833 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 206-833 bp Feature: gene Location: 1479-2822 bp Feature: domain Description: recD_rel Location: 1497-2142 bp Feature: domain Description: recD_rel Location: 1 497-21 42 bp Feature: domain Description: recD_rel Location: 2658-2802 bp Feature: domain Description: recD_rel Location: 2658-2802 bp Feature: gene Location: 2930-3901 bp Feature: domain Description: WYL Location: 3374-3887 bp Feature: domain Description: WYL Location: 3374-3887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, recD_rel (TIGR01448), WYL (pfam13280)

Seq: DMIU01000746.1 TPA_asm: Runella sp. isolate UBA8721 contig_74621, whole genome shotgun sequence (12722 bp)
Overview 1 RT 1: 4431-8917 bp Neighborhood of RT #1 [4431, 9072] ruvC RVT-UG2 HigA PerM Feature: gene Location: 4431-5087 bp Feature: domain Description: ruvC Location: 4533-5001 bp Feature: domain Description: ruvC Location: 4533-5001 bp Feature: gene Location: 5481-5672 bp Feature: gene Location: 5695-7134 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 5944-6820 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 5944-682 0 bp Feature: gene Location: 7303-7677 bp Feature: domain Description: HigA Location: 7324-7669 bp Feature: domain Description: HigA Location: 732 4-7669 bp Feature: gene Location: 7870-9072 bp Feature: domain Description: PerM Location: 7918-8917 bp Feature: domain Description: PerM Location: 7918-8917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ruvC (TIGR00228), RVT-UG2, HigA (COG5499), PerM (COG0628)