myRT

myRT report for GCA_003452155.1_ASM345215v1

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Seq: DMJR01000338.1 TPA_asm: Planctomycetes bacterium isolate UBA8898 contig_29607, whole genome shotgun sequence (11923 bp)
Overview 1 RT 1: 7030-11923 bp Neighborhood of RT #1 [7030, 11923] PLN02432 Beta_helix AbiEii RVT-GII Feature: gene Location: 7030-8222 bp Feature: domain Description: PLN02432 Location: 7078-7210 bp Feature: domain Description: PLN02432 Location: 7078-721 0 bp Feature: domain Description: Beta_helix Location: 7333-7759 bp Feature: domain Description: Beta_helix Location: 7333-7759 bp Feature: gene Location: 8776-10278 bp Feature: domain Description: AbiEii Location: 9424-10099 bp Feature: domain Description: AbiEii Location: 9424-1 0099 bp Feature: gene Location: 10173-11635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10581-11022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0581 -1 1 022 bp Feature: gene Location: 11693-11923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PLN02432 (putative pectinesterase), Beta_helix (pfam13229), AbiEii (pfam08843)

Seq: DMJR01000291.1 TPA_asm: Planctomycetes bacterium isolate UBA8898 contig_34575, whole genome shotgun sequence (5536 bp)
Overview 1 RT 1: 407-5206 bp Neighborhood of RT #1 [407, 5220] RVT-GII GIIM PRK06349 Feature: gene Location: 407-1855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 839-1511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 839-1511 bp Feature: domain Description: GIIM Note: maturase Location: 1589-1793 bp Feature: domain Description: GIIM Note: maturase Location: 1589-1793 bp Feature: gene Location: 2033-3907 bp Feature: gene Location: 3904-5220 bp Feature: domain Description: PRK06349 Location: 3907-5206 bp Feature: domain Description: PRK06349 Location: 3907-52 06 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06349 (homoserine dehydrogenase; Provisional), RVT-GII, GIIM (pfam08388)

Seq: DMJR01000093.1 TPA_asm: Planctomycetes bacterium isolate UBA8898 contig_9823, whole genome shotgun sequence (13631 bp)
Overview 1 RT 1: 7787-13573 bp Neighborhood of RT #1 [7787, 13631] Int_alpha Int_alpha Int_alpha Int_alpha Int_alpha Int_alpha Dockerin_I Int_alpha RVT-Retrons Feature: gene Location: 7787-12685 bp Feature: domain Description: Int_alpha Location: 7826-7949 bp Feature: domain Description: Int_alpha Location: 7826-7949 bp Feature: domain Description: Int_alpha Location: 8024-8180 bp Feature: domain Description: Int_alpha Location: 8024-8180 bp Feature: domain Description: Int_alpha Location: 8234-8372 bp Feature: domain Description: Int_alpha Location: 823 4-83 72 bp Feature: domain Description: Int_alpha Location: 8456-8573 bp Feature: domain Description: Int_alpha Location: 8456-8573 bp Feature: domain Description: Int_alpha Location: 8645-8783 bp Feature: domain Description: Int_alpha Location: 8645-8783 bp Feature: domain Description: Int_alpha Location: 8858-8981 bp Feature: domain Description: Int_alpha Location: 8858-8981 bp Feature: domain Description: Dockerin_I Location: 12419-12578 bp Feature: domain Description: Dockerin_I Location: 12419-12578 bp Feature: gene Location: 12502-13143 bp Feature: domain Description: Int_alpha Location: 12859-12979 bp Feature: domain Description: Int_alpha Location: 12859-12979 bp Feature: gene Location: 13213-13631 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13216-13573 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 216-13 573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Int_alpha (smart00191), RVT-Retrons, Dockerin_I (cd14256)