myRT

myRT report for GCA_003452545.1_ASM345254v1

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Seq: DMNX01000122.1 TPA_asm: Bacteroides sp. isolate UBA10791 contig_3888, whole genome shotgun sequence (10723 bp)
Overview 1 RT 1: 41-3706 bp Neighborhood of RT #1 [41, 3706] RVT-GII Intron_maturas2 Feature: gene Location: 41-283 bp Feature: gene Location: 485-2080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749-1571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 749-1 571 bp Feature: domain Description: Intron_maturas2 Location: 1649-1943 bp Feature: domain Description: Intron_maturas2 Location: 1 649-1 943 bp Feature: gene Location: 2680-2931 bp Feature: gene Location: 3050-3706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: DMNX01000076.1 TPA_asm: Bacteroides sp. isolate UBA10791 contig_5640, whole genome shotgun sequence (9764 bp)
Overview 1 RT 1: 5082-9557 bp Neighborhood of RT #1 [5082, 9673] VirE_N RVT-UG28b DDE_Tnp_IS66 Feature: gene Location: 5082-5855 bp Feature: gene Location: 5852-6856 bp Feature: domain Description: VirE_N Location: 6041-6416 bp Feature: domain Description: VirE_N Location: 6041-6416 bp Feature: gene Location: 7015-8757 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 7441-8176 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 7441-8176 bp Feature: gene Location: 8839-9066 bp Feature: gene Location: 9059-9673 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9140-9557 bp Feature: domain Description: DDE_Tnp_IS66 Location: 9140-9557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirE_N (pfam08800), RVT-UG28b, DDE_Tnp_IS66 (pfam03050)

Seq: DMNX01000126.1 TPA_asm: Bacteroides sp. isolate UBA10791 contig_6450, whole genome shotgun sequence (3271 bp)
Overview 1 RT 1: 3-2270 bp Neighborhood of RT #1 [3, 2638] ruvA Ape1-like_AP-endo RVT-GII GIIM Feature: gene Location: 3-329 bp Feature: domain Description: ruvA Location: 6-327 bp Feature: domain Description: ruvA Location: 6-3 27 bp Feature: gene Location: 331-1080 bp Feature: domain Description: Ape1-like_AP-endo Location: 334-1069 bp Feature: domain Description: Ape1-like_AP-endo Location: 3 3 4-1069 bp Feature: gene Location: 1238-2638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1466-2090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1466-2090 bp Feature: domain Description: GIIM Note: maturase Location: 2159-2270 bp Feature: domain Description: GIIM Note: maturase Location: 2159-2270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ruvA (TIGR00084), Ape1-like_AP-endo (cd09087), RVT-GII, GIIM (pfam08388)

Seq: DMNX01000037.1 TPA_asm: Bacteroides sp. isolate UBA10791 contig_8990, whole genome shotgun sequence (17961 bp)
Overview 1 RT 1: 264-2789 bp Neighborhood of RT #1 [264, 2789] RVT-AbiP2 Feature: gene Location: 264-548 bp Feature: gene Location: 802-2370 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1270-1726 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1270-1726 bp Feature: gene Location: 2489-2626 bp Feature: gene Location: 2634-2789 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2