myRT

myRT report for GCA_003455175.1_ASM345517v1

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Seq: DMRZ01000107.1 TPA_asm: Lachnospiraceae bacterium isolate UBA7906 contig_11083, whole genome shotgun sequence (3331 bp)
Overview 1 RT 1: 241-2954 bp Neighborhood of RT #1 [241, 3082] PRiA4_ORF3 RVT-GII YcaC_related PIN_3 PhdYeFM_antitox Feature: gene Location: 241-1272 bp Ori: HAP03165.1 Feature: domain Description: PRiA4_ORF3 Location: 874-1201 bp Feature: domain Description: PRiA4_ORF3 Location: 874-1 201 bp Feature: gene Location: 1514-2248 bp Ori: HAP03166.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1532-1760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 532-1 760 bp Feature: domain Description: YcaC_related Location: 1958-2225 bp Feature: domain Description: YcaC_related Location: 1 958-2225 bp Feature: gene Location: 2336-2731 bp Ori: HAP03167.1 Feature: domain Description: PIN_3 Location: 2345-2669 bp Feature: domain Description: PIN_3 Location: 2345-2669 bp Feature: gene Location: 2747-3082 bp Ori: HAP03168.1 Feature: domain Description: PhdYeFM_antitox Location: 2750-2954 bp Feature: domain Description: PhdYeFM_antitox Location: 2750-2954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRiA4_ORF3 (pfam07929), RVT-GII, YcaC_related (cd01012), PIN_3 (pfam13470), PhdYeFM_antitox (pfam02604)

Seq: DMRZ01000195.1 TPA_asm: Lachnospiraceae bacterium isolate UBA7906 contig_74017, whole genome shotgun sequence (9739 bp)
Overview 1 RT 1: 1702-5748 bp Neighborhood of RT #1 [1702, 6074] CA CA RVT-DGRs Avd_like pfam12571 Feature: gene Location: 1702-2616 bp Ori: HAP03748.1 Feature: domain Description: CA Location: 1795-2023 bp Feature: domain Description: CA Location: 1795-2 02 3 bp Feature: domain Description: CA Location: 2062-2314 bp Feature: domain Description: CA Location: 2 062 -2 314 bp Feature: gene Location: 2609-3343 bp Feature: gene Location: 3273-4574 bp Ori: HAP03749.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3495-4110 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3495-4110 bp Feature: gene Location: 4903-5316 bp Ori: HAP03750.1 Feature: domain Description: Avd_like Location: 4957-5287 bp Feature: domain Description: Avd_like Location: 4957-52 87 bp Feature: gene Location: 5313-6074 bp Ori: HAP03751.1 Feature: domain Description: pfam12571 Location: 5316-5748 bp Feature: domain Description: pfam12 571 Location: 5316-5748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CA (smart00112), RVT-DGRs, Avd_like (cd16376), pfam12571 (DUF3751;Phage tail-collar fibre protein)