myRT

myRT report for GCA_003457065.1_ASM345706v1

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Seq: DMJQ01000120.1 TPA_asm: Clostridiales bacterium isolate UBA11329 contig_1603, whole genome shotgun sequence (36222 bp)
Overview 1 RT 1: 33571-36221 bp Neighborhood of RT #1 [33571, 36222] RVT-GII GIIM RAYT Feature: gene Location: 33571-33753 bp Feature: gene Location: 34013-34221 bp Feature: gene Location: 34457-35866 bp Ori: HAQ40960.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34808-35426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34808-35426 bp Feature: domain Description: GIIM Note: maturase Location: 35477-35711 bp Feature: domain Description: GIIM Note: maturase Location: 35477-3571 1 bp Feature: gene Location: 36083-36222 bp Ori: HAQ40961.1 Feature: domain Description: RAYT Location: 36095-36221 bp Feature: domain Description: RAYT Location: 36095-36221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RAYT (COG1943)

Seq: DMJQ01000056.1 TPA_asm: Clostridiales bacterium isolate UBA11329 contig_2797, whole genome shotgun sequence (16169 bp)
Overview 1 RT 1: 6757-11701 bp Neighborhood of RT #1 [6757, 11701] HTH_XRE Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like RVT-CRISPR-like N6_N4_Mtase N6_N4_Mtase Feature: gene Location: 6757-7152 bp Ori: HAQ40144.1 Feature: domain Description: HTH_XRE Location: 6778-6940 bp Feature: domain Description: HTH_XRE Location: 6778-6940 bp Feature: gene Location: 7410-8468 bp Ori: HAQ40145.1 Feature: domain Description: Arm-DNA-bind_4 Location: 7443-7572 bp Feature: domain Description: Arm-DNA-bind_4 Location: 7443-7572 bp Feature: domain Description: Phage_int_SAM_3 Location: 7584-7749 bp Feature: domain Description: Phage_int_SAM_3 Location: 7584-7749 bp Feature: domain Description: INT_ICEBs1_C_like Location: 7917-8412 bp Feature: domain Description: INT_ICEBs1_C_like Location: 7917-8412 bp Feature: gene Location: 8665-10221 bp Ori: HAQ40146.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 8983-9679 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 8983-9679 bp Feature: gene Location: 10410-11159 bp Ori: HAQ40147.1 Feature: domain Description: N6_N4_Mtase Location: 10458-10674 bp Feature: domain Description: N6_N4_Mtase Location: 10458-10674 bp Feature: domain Description: N6_N4_Mtase Location: 10788-11154 bp Feature: domain Description: N6_N4_Mtase Location: 10788-11154 bp Feature: gene Location: 11159-11701 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), INT_ICEBs1_C_like (cd01189), RVT-CRISPR, N6_N4_Mtase (pfam01555)