myRT

myRT report for GCA_003457595.1_ASM345759v1

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Seq: QRSS01000006.1 Blautia obeum strain AF29-2BH AF29-2BH.Scaf6, whole genome shotgun sequence (202378 bp)
Overview 1 RT 1: 5592-9304 bp Neighborhood of RT #1 [5592, 9312] OmpR HTH_17 RVT-GII GIIM RVT-GII BID_2 Feature: gene Location: 5592-6290 bp Feature: domain Description: OmpR Location: 5604-6285 bp Feature: domain Description: OmpR Location: 5604-6285 bp Feature: gene Location: 6283-6465 bp Feature: domain Description: HTH_17 Location: 6292-6421 bp Feature: domain Description: HTH_1 7 Location: 6292-6421 bp Feature: gene Location: 6535-7518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6544-7135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6544-71 35 bp Feature: domain Description: GIIM Note: maturase Location: 7207-7429 bp Feature: domain Description: GIIM Note: maturase Location: 7207-7429 bp Feature: gene Location: 8081-8662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8294-8663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8294-8663 bp Feature: gene Location: 8664-8939 bp Feature: gene Location: 9172-9312 bp Feature: domain Description: BID_2 Location: 9175-9304 bp Feature: domain Description: BID_2 Location: 91 75-9304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpR (COG0745), HTH_17 (pfam12728), RVT-GII, GIIM (pfam08388), BID_2 (smart00635)

Seq: QRSS01000048.1 Blautia obeum strain AF29-2BH AF29-2BH.Scaf48, whole genome shotgun sequence (1906 bp)
Overview 1 RT 1: 72-1906 bp Neighborhood of RT #1 [72, 1906] RVT-GII GIIM Feature: gene Location: 72-1466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-1014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 390-1014 bp Feature: domain Description: GIIM Note: maturase Location: 1071-1287 bp Feature: domain Description: GIIM Note: maturase Location: 1071-12 87 bp Feature: gene Location: 1574-1720 bp Feature: gene Location: 1696-1906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QRSS01000015.1 Blautia obeum strain AF29-2BH AF29-2BH.Scaf15, whole genome shotgun sequence (73918 bp)
Overview 1 RT 1: 20216-25877 bp Neighborhood of RT #1 [20216, 25897] HTH_XRE VirD4 RVT-GII VirD4 DUF3801 Feature: gene Location: 20216-20668 bp Feature: domain Description: HTH_XRE Location: 20234-20399 bp Feature: domain Description: HTH_XRE Location: 2023 4-203 99 bp Feature: gene Location: 20772-21806 bp Feature: domain Description: VirD4 Location: 20892-21678 bp Feature: domain Description: VirD4 Location: 20892-21678 bp Feature: gene Location: 21968-23875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22298-23042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22298-23 042 bp Feature: gene Location: 24534-25337 bp Feature: domain Description: VirD4 Location: 24792-25299 bp Feature: domain Description: VirD4 Location: 24792-25299 bp Feature: gene Location: 25334-25897 bp Feature: domain Description: DUF3801 Location: 25526-25877 bp Feature: domain Description: DUF3 801 Location: 25526-25877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), VirD4 (COG3505), RVT-GII, DUF3801 (pfam12687)