myRT

myRT report for GCA_003457795.1_ASM345779v1

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Seq: QRTF01000025.1 Roseburia inulinivorans strain AF28-15 AF28-15.Scaf25, whole genome shotgun sequence (54725 bp)
Overview 1 RT 1: 51905-54566 bp Neighborhood of RT #1 [51905, 54625] spoVFB RVT-GII GIIM Feature: gene Location: 51905-52492 bp Feature: domain Description: spoVFB Location: 51908-52484 bp Feature: domain Description: spoVFB Location: 51 908-52484 bp Feature: gene Location: 53003-53244 bp Feature: gene Location: 53336-54625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53627-54260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53627-54260 bp Feature: domain Description: GIIM Note: maturase Location: 54341-54566 bp Feature: domain Description: GIIM Note: maturase Location: 54341 -54566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT spoVFB (PRK08305), RVT-GII, GIIM (pfam08388)

Seq: QRTF01000085.1 Roseburia inulinivorans strain AF28-15 AF28-15.Scaf85, whole genome shotgun sequence (1926 bp)
Overview 1 RT 1: 73-1926 bp Neighborhood of RT #1 [73, 1926] RVT-GII GIIM Feature: gene Location: 73-1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391-1015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391-1015 bp Feature: domain Description: GIIM Note: maturase Location: 1072-1282 bp Feature: domain Description: GIIM Note: maturase Location: 1072 -12 82 bp Feature: gene Location: 1593-1739 bp Feature: gene Location: 1742-1926 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QRTF01000011.1 Roseburia inulinivorans strain AF28-15 AF28-15.Scaf11, whole genome shotgun sequence (90776 bp)
Overview 1 RT 1: 35615-39016 bp Neighborhood of RT #1 [35615, 39027] PHA00653 Avd_like RVT-DGRs XhlA Feature: gene Location: 35615-36712 bp Feature: domain Description: PHA00653 Location: 35711-36710 bp Feature: domain Description: PHA00653 Location: 3 5711-3 6710 bp Feature: gene Location: 36784-37188 bp Feature: domain Description: Avd_like Location: 36871-37177 bp Feature: domain Description: Avd_like Location: 3 6871-3 7177 bp Feature: gene Location: 37486-38538 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37696-38302 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 7696-3 83 02 bp Feature: gene Location: 38513-38776 bp Feature: gene Location: 38812-39027 bp Feature: domain Description: XhlA Location: 38875-39016 bp Feature: domain Description: XhlA Location: 3 8875-3 9016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs, XhlA (pfam10779)