myRT

myRT report for GCA_003458365.1_ASM345836v1

Download annotations/find similar RTs

Seq: QRUB01000001.1 Bacteroides stercoris strain AF25-6 AF25-6.Scaf1, whole genome shotgun sequence (772192 bp)
Overview 1 RT 1: 96876-100813 bp Neighborhood of RT #1 [96876, 100813] RVT-DGRs Feature: gene Location: 96876-97256 bp Feature: gene Location: 97253-97681 bp Feature: gene Location: 97644-98831 bp Ori: RGR29758.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97977-98604 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97977-98604 bp Feature: gene Location: 99164-100525 bp Feature: gene Location: 100535-100813 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QRUB01000020.1 Bacteroides stercoris strain AF25-6 AF25-6.Scaf20, whole genome shotgun sequence (61170 bp)
Overview 1 RT 1: 47029-55423 bp Neighborhood of RT #1 [47029, 56601] N6_Mtase COG4646 RVT_N RVT-GII GIIM KAP_NTPase Feature: gene Location: 47029-51066 bp Ori: RGR26406.1 Feature: domain Description: N6_Mtase Location: 47524-47950 bp Feature: domain Description: N6_Mtase Location: 4752 4-47950 bp Feature: domain Description: COG4646 Location: 48718-50449 bp Feature: domain Description: COG4646 Location: 48718-50449 bp Feature: gene Location: 51554-51757 bp Feature: gene Location: 51723-53390 bp Ori: RGR26408.1 Gene: ltrA Feature: domain Description: RVT_N Location: 51777-52020 bp Feature: domain Description: RVT_N Location: 51777-52 02 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52065-52713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 065-52 713 bp Feature: domain Description: GIIM Note: maturase Location: 52767-52998 bp Feature: domain Description: GIIM Note: maturase Location: 52 767-52 998 bp Feature: gene Location: 53374-54471 bp Feature: gene Location: 54736-56601 bp Ori: RGR26410.1 Feature: domain Description: KAP_NTPase Location: 54775-55423 bp Feature: domain Description: KAP_NTPase Location: 54775-5542 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), KAP_NTPase (pfam07693)

Seq: QRUB01000007.1 Bacteroides stercoris strain AF25-6 AF25-6.Scaf7, whole genome shotgun sequence (173887 bp)
Overview 1 RT 1: 86185-90120 bp Neighborhood of RT #1 [86185, 90120] RVT-UG27 Feature: gene Location: 86185-86664 bp Feature: gene Location: 86714-87213 bp Feature: gene Location: 87536-88798 bp Ori: RGR27832.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 87728-88364 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 87728-883 64 bp Feature: gene Location: 88791-89459 bp Feature: gene Location: 89473-90120 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27