myRT

myRT report for GCA_003458395.1_ASM345839v1

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Seq: QRUE01000016.1 Bacteroides stercoris strain AF25-30AC AF25-30AC.Scaf16, whole genome shotgun sequence (100862 bp)
Overview 1 RT 1: 38-3879 bp Neighborhood of RT #1 [38, 3879] RVT-DGRs Feature: gene Location: 38-220 bp Feature: gene Location: 230-1591 bp Feature: gene Location: 1924-3111 bp Ori: RGR33886.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2257-2884 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2257-2884 bp Feature: gene Location: 3074-3502 bp Feature: gene Location: 3499-3879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QRUE01000007.1 Bacteroides stercoris strain AF25-30AC AF25-30AC.Scaf7, whole genome shotgun sequence (175605 bp)
Overview 1 RT 1: 87921-91856 bp Neighborhood of RT #1 [87921, 91856] RVT-UG27 Feature: gene Location: 87921-88400 bp Feature: gene Location: 88450-88949 bp Feature: gene Location: 89272-90534 bp Ori: RGR36884.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 89464-90100 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 89464-90100 bp Feature: gene Location: 90527-91195 bp Feature: gene Location: 91209-91856 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: QRUE01000008.1 Bacteroides stercoris strain AF25-30AC AF25-30AC.Scaf8, whole genome shotgun sequence (166760 bp)
Overview 1 RT 1: 153183-161577 bp Neighborhood of RT #1 [153183, 162755] N6_Mtase COG4646 RVT_N RVT-GII GIIM KAP_NTPase Feature: gene Location: 153183-157220 bp Ori: RGR36433.1 Feature: domain Description: N6_Mtase Location: 153678-154104 bp Feature: domain Description: N6_Mtase Location: 153 678-154104 bp Feature: domain Description: COG4646 Location: 154872-156603 bp Feature: domain Description: COG4646 Location: 154872-156603 bp Feature: gene Location: 157708-157911 bp Feature: gene Location: 157877-159544 bp Ori: RGR36435.1 Gene: ltrA Feature: domain Description: RVT_N Location: 157931-158174 bp Feature: domain Description: RVT_N Location: 15793 1-158174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158219-158867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158219-158867 bp Feature: domain Description: GIIM Note: maturase Location: 158921-159152 bp Feature: domain Description: GIIM Note: maturase Location: 158921-159152 bp Feature: gene Location: 159528-160625 bp Feature: gene Location: 160890-162755 bp Ori: RGR36437.1 Feature: domain Description: KAP_NTPase Location: 160929-161577 bp Feature: domain Description: KAP_NTPase Location: 160929-161577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), KAP_NTPase (pfam07693)