myRT

myRT report for GCA_003458515.1_ASM345851v1

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Seq: QRUL01000024.1 [Eubacterium] rectale strain AF24-9LB AF24-9LB.Scaf24, whole genome shotgun sequence (33164 bp)
Overview 1 RT 1: 18270-24439 bp Neighborhood of RT #1 [18270, 24444] HTH_1 PBP2_GltC_like mycofact_OYE_2 RVT-GII GIIM PRK12548 Feature: gene Location: 18270-19151 bp Feature: domain Description: HTH_1 Location: 18279-18453 bp Feature: domain Description: HTH_1 Location: 1 8279-1 8453 bp Feature: domain Description: PBP2_GltC_like Location: 18549-19134 bp Feature: domain Description: PBP2_GltC_like Location: 1 8549-1 91 34 bp Feature: gene Location: 19451-21451 bp Feature: domain Description: mycofact_OYE_2 Location: 19472-21419 bp Feature: domain Description: mycofact_OYE_2 Location: 1 9472-21 41 9 bp Feature: gene Location: 21591-22985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21909-22533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 909-22533 bp Feature: domain Description: GIIM Note: maturase Location: 22590-22812 bp Feature: domain Description: GIIM Note: maturase Location: 22590-2281 2 bp Feature: gene Location: 23093-23335 bp Feature: gene Location: 23575-24444 bp Feature: domain Description: PRK12548 Location: 23578-24439 bp Feature: domain Description: PRK1 2548 Location: 23578-24439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_1 (pfam00126), PBP2_GltC_like (cd08434), mycofact_OYE_2 (TIGR03997), RVT-GII, GIIM (pfam08388), PRK12548 (shikimate dehydrogenase)

Seq: QRUL01000003.1 [Eubacterium] rectale strain AF24-9LB AF24-9LB.Scaf3, whole genome shotgun sequence (263097 bp)
Overview 1 RT 1: 85060-96247 bp Neighborhood of RT #1 [85060, 96247] HELICc RVT-GII Intron_maturas2 HNHc LPD25 HsdM COG4646 Feature: gene Location: 85060-85389 bp Feature: gene Location: 85469-86827 bp Feature: domain Description: HELICc Location: 85559-85928 bp Feature: domain Description: HELICc Location: 85559-8592 8 bp Feature: gene Location: 86932-88710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87193-87985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87193-87985 bp Feature: domain Description: Intron_maturas2 Location: 88090-88303 bp Feature: domain Description: Intron_maturas2 Location: 88090-88303 bp Feature: domain Description: HNHc Note: nucleases Location: 88486-88672 bp Feature: domain Description: HNHc Note: nucleases Location: 88486-88672 bp Feature: gene Location: 89210-95983 bp Feature: domain Description: LPD25 Location: 91454-91754 bp Feature: domain Description: LPD2 5 Location: 91454-91754 bp Feature: domain Description: HsdM Location: 92837-93386 bp Feature: domain Description: HsdM Location: 92 837-93386 bp Feature: domain Description: COG4646 Location: 93455-95849 bp Feature: domain Description: COG4646 Location: 93455-95849 bp Feature: gene Location: 96023-96247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HELICc (smart00490), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), LPD25 (pfam18840), HsdM (COG0286), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: QRUL01000001.1 [Eubacterium] rectale strain AF24-9LB AF24-9LB.Scaf1, whole genome shotgun sequence (498762 bp)
Overview 1 RT 1: 99790-103496 bp Neighborhood of RT #1 [99790, 103496] pfam12571 Avd_like RVT-DGRs Feature: gene Location: 99790-101085 bp Feature: domain Description: pfam12571 Location: 99793-100096 bp Feature: domain Description: pfam12571 Location: 99793 -100096 bp Feature: gene Location: 101145-101555 bp Feature: domain Description: Avd_like Location: 101211-101535 bp Feature: domain Description: Avd_like Location: 101211-10153 5 bp Feature: gene Location: 101946-103085 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 102225-102828 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 102225-102828 bp Feature: gene Location: 103082-103303 bp Feature: gene Location: 103296-103496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, pfam12571 (DUF3751;Phage tail-collar fibre protein)