myRT

myRT report for GCA_003458755.1_ASM345875v1

Download annotations/find similar RTs

Seq: QRVO01000096.1 Bacteroides xylanisolvens strain AF21-6AC AF21-6AC.Scaf96, whole genome shotgun sequence (21443 bp)
Overview 1 RT 1: 8226-20626 bp Neighborhood of RT #1 [8226, 20751] DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons PDDEXK_2 Feature: gene Location: 8226-10024 bp Feature: gene Location: 10121-16162 bp Feature: domain Description: DUF4011 Location: 11351-11864 bp Feature: domain Description: DUF401 1 Location: 1 1 351 -1 1 864 bp Feature: domain Description: DEXXQc_SF1 Location: 12203-12632 bp Feature: domain Description: DEXXQc_SF1 Location: 1 2203-1 2632 bp Feature: domain Description: DEXXQc_SF1 Location: 13631-14390 bp Feature: domain Description: DEXXQc_SF1 Location: 1 3631 -1 4390 bp Feature: domain Description: TIGR00376 Location: 14519-14909 bp Feature: domain Description: TIGR00376 Location: 1 451 9-1 4909 bp Feature: domain Description: MTES_1575 Location: 15062-15347 bp Feature: domain Description: MTES_1 575 Location: 1 5062-1 5347 bp Feature: domain Description: DUF3320 Location: 15677-15812 bp Feature: domain Description: DUF3320 Location: 1 5677-1 581 2 bp Feature: gene Location: 16213-17343 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16534-17077 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 6534-1 7077 bp Feature: gene Location: 17551-19713 bp Feature: gene Location: 19927-20751 bp Feature: domain Description: PDDEXK_2 Location: 19948-20626 bp Feature: domain Description: PDDEXK_2 Location: 1 9948-20626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), RVT-Retrons, PDDEXK_2 (pfam12784)

Seq: QRVO01000019.1 Bacteroides xylanisolvens strain AF21-6AC AF21-6AC.Scaf19, whole genome shotgun sequence (68426 bp)
Overview 1 RT 1: 3140-12094 bp Neighborhood of RT #1 [3140, 12711] KAP_NTPase RVT_N RVT-GII GIIM N6_Mtase COG4646 Feature: gene Location: 3140-5005 bp Feature: domain Description: KAP_NTPase Location: 3179-3827 bp Feature: domain Description: KAP_NTPase Location: 3179-382 7 bp Feature: gene Location: 5269-6366 bp Feature: gene Location: 6350-8017 bp Feature: RT Description: RVT_N Location: 6404-6647 bp Feature: RT Description: RVT_N Location: 6404-6647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6692-7340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6692 -7340 bp Feature: domain Description: GIIM Note: maturase Location: 7394-7625 bp Feature: domain Description: GIIM Note: maturase Location: 7394-762 5 bp Feature: gene Location: 7983-8186 bp Feature: gene Location: 8674-12711 bp Feature: domain Description: N6_Mtase Location: 9169-9595 bp Feature: domain Description: N6_Mtase Location: 9169-9595 bp Feature: domain Description: COG4646 Location: 10363-12094 bp Feature: domain Description: COG4646 Location: 10363-12 094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KAP_NTPase (pfam07693), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )