myRT

myRT report for GCA_003458885.1_ASM345888v1

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Seq: QRVX01000041.1 Coprococcus sp. AF21-14LB AF21-14LB.Scaf41, whole genome shotgun sequence (21664 bp)
Overview 1 RT 1: 16690-20359 bp Neighborhood of RT #1 [16690, 21432] PRK12333 RVT-Retrons AAA_15 Feature: gene Location: 16690-17208 bp Feature: domain Description: PRK12333 Location: 16708-17134 bp Feature: domain Description: PRK1 2333 Location: 1 6708-1 71 34 bp Feature: gene Location: 17251-18099 bp Feature: gene Location: 18101-19195 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18218-18821 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 821 8-1 8821 bp Feature: gene Location: 19408-21432 bp Feature: domain Description: AAA_15 Location: 19438-20359 bp Feature: domain Description: AAA_1 5 Location: 1 9438-20359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12333 (nucleoside triphosphate pyrophosphohydrolase; Reviewed), RVT-Retrons, AAA_15 (pfam13175)

Seq: QRVX01000104.1 Coprococcus sp. AF21-14LB AF21-14LB.Scaf104, whole genome shotgun sequence (2349 bp)
Overview 1 RT 1: 191-1439 bp Neighborhood of RT #1 [191, 1657] RVT_N RVT-GII GIIM Feature: gene Location: 191-1657 bp Feature: RT Description: RVT_N Location: 209-452 bp Feature: RT Description: RVT_N Location: 2 09-452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 512 -1154 bp Feature: domain Description: GIIM Note: maturase Location: 1205-1439 bp Feature: domain Description: GIIM Note: maturase Location: 12 05-1439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QRVX01000112.1 Coprococcus sp. AF21-14LB AF21-14LB.Scaf112, whole genome shotgun sequence (1820 bp)
Overview 1 RT 1: 137-1656 bp Neighborhood of RT #1 [137, 1817] RVT-GII GIIM Feature: gene Location: 137-277 bp Feature: gene Location: 405-1817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 756-1377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 756-13 77 bp Feature: domain Description: GIIM Note: maturase Location: 1431-1656 bp Feature: domain Description: GIIM Note: maturase Location: 143 1-1656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QRVX01000120.1 Coprococcus sp. AF21-14LB AF21-14LB.Scaf120, whole genome shotgun sequence (1521 bp)
Overview 1 RT 1: 90-1188 bp Neighborhood of RT #1 [90, 1373] RVT-GII GIIM Feature: gene Location: 90-1373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300-915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 300-915 bp Feature: domain Description: GIIM Note: maturase Location: 975-1188 bp Feature: domain Description: GIIM Note: maturase Location: 975-1188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)