myRT

myRT report for GCA_003459185.1_ASM345918v1

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Seq: QRUX01000004.1 [Eubacterium] rectale strain AF24-17 AF24-17.Scaf4, whole genome shotgun sequence (217096 bp)
Overview 1 RT 1: 39021-50208 bp Neighborhood of RT #1 [39021, 50208] HELICc RVT-GII Intron_maturas2 HNHc LPD25 HsdM COG4646 Feature: gene Location: 39021-39350 bp Feature: gene Location: 39430-40788 bp Feature: domain Description: HELICc Location: 39520-39889 bp Feature: domain Description: HELICc Location: 39520-39889 bp Feature: gene Location: 40893-42671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41154-41946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 1 54-41 946 bp Feature: domain Description: Intron_maturas2 Location: 42051-42264 bp Feature: domain Description: Intron_maturas2 Location: 42051 -42264 bp Feature: domain Description: HNHc Note: nucleases Location: 42447-42633 bp Feature: domain Description: HNHc Note: nucleases Location: 42447-42633 bp Feature: gene Location: 43171-49944 bp Feature: domain Description: LPD25 Location: 45415-45715 bp Feature: domain Description: LPD25 Location: 4541 5-4571 5 bp Feature: domain Description: HsdM Location: 46798-47347 bp Feature: domain Description: HsdM Location: 46798-47347 bp Feature: domain Description: COG4646 Location: 47416-49810 bp Feature: domain Description: COG4646 Location: 4741 6-4981 0 bp Feature: gene Location: 49984-50208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HELICc (smart00490), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), LPD25 (pfam18840), HsdM (COG0286), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: QRUX01000023.1 [Eubacterium] rectale strain AF24-17 AF24-17.Scaf23, whole genome shotgun sequence (33200 bp)
Overview 1 RT 1: 18306-24475 bp Neighborhood of RT #1 [18306, 24480] HTH_1 PBP2_GltC_like mycofact_OYE_2 RVT-GII GIIM PRK12548 Feature: gene Location: 18306-19187 bp Feature: domain Description: HTH_1 Location: 18315-18489 bp Feature: domain Description: HTH_1 Location: 18315-18489 bp Feature: domain Description: PBP2_GltC_like Location: 18585-19170 bp Feature: domain Description: PBP2 _GltC_like Location: 18585-19170 bp Feature: gene Location: 19487-21487 bp Feature: domain Description: mycofact_OYE_2 Location: 19508-21455 bp Feature: domain Description: mycofact_OYE_2 Location: 19508-2 1455 bp Feature: gene Location: 21627-23021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21945-22569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1945-2 2 569 bp Feature: domain Description: GIIM Note: maturase Location: 22626-22848 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 62 6-2 2 848 bp Feature: gene Location: 23129-23371 bp Feature: gene Location: 23611-24480 bp Feature: domain Description: PRK12548 Location: 23614-24475 bp Feature: domain Description: PRK12 548 Location: 2 3614-2 4475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_1 (pfam00126), PBP2_GltC_like (cd08434), mycofact_OYE_2 (TIGR03997), RVT-GII, GIIM (pfam08388), PRK12548 (shikimate dehydrogenase)