myRT

myRT report for GCA_003459535.1_ASM345953v1

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Seq: QRWE01000031.1 Bacteroides vulgatus strain AF20-10 AF20-10.Scaf31, whole genome shotgun sequence (51093 bp)
Overview 1 RT 1: 45569-51065 bp Neighborhood of RT #1 [45569, 51065] HTH_17 HTH_17 HTH_17 HTH_17 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-Retrons Feature: gene Location: 45569-46465 bp Feature: domain Description: HTH_17 Location: 45764-45899 bp Feature: domain Description: HTH_1 7 Location: 45764-45899 bp Feature: domain Description: HTH_17 Location: 45965-46112 bp Feature: domain Description: HTH_1 7 Location: 45965-461 1 2 bp Feature: domain Description: HTH_17 Location: 46139-46268 bp Feature: domain Description: HTH_1 7 Location: 461 39-46268 bp Feature: domain Description: HTH_17 Location: 46307-46448 bp Feature: domain Description: HTH_1 7 Location: 46307-46448 bp Feature: gene Location: 46558-47664 bp Feature: domain Description: Arm-DNA-bind_5 Location: 46582-46789 bp Feature: domain Description: Arm-DNA-bind_5 Location: 46582-46789 bp Feature: domain Description: Phage_int_SAM_5 Location: 46846-47113 bp Feature: domain Description: Phage_int_SAM_5 Location: 46846-471 1 3 bp Feature: domain Description: INTN1_C_like Location: 47173-47632 bp Feature: domain Description: INTN1 _C_like Location: 471 73-47632 bp Feature: gene Location: 47773-48822 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48001-48580 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48001 -48580 bp Feature: gene Location: 48957-50255 bp Feature: gene Location: 50538-51065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-Retrons

Seq: QRWE01000089.1 Bacteroides vulgatus strain AF20-10 AF20-10.Scaf89, whole genome shotgun sequence (5084 bp)
Overview 1 RT 1: 1830-5084 bp Neighborhood of RT #1 [1830, 5084] RVT-DGRs Feature: gene Location: 1830-2072 bp Feature: gene Location: 2258-2743 bp Feature: gene Location: 2740-4041 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2953-3547 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 953-3547 bp Feature: gene Location: 4417-4650 bp Feature: gene Location: 4780-5084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs