myRT

myRT report for GCA_003459675.1_ASM345967v1

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Seq: QRWP01000003.1 Bacteroides clarus strain AF19-1AC AF19-1AC.Scaf3, whole genome shotgun sequence (465869 bp)
Overview 1 RT 1: 20950-27048 bp Neighborhood of RT #1 [20950, 27048] DUF3987 HTH_17 RVT-UG2 DUF772 DDE_Tnp_1 Feature: gene Location: 20950-22326 bp Ori: RGT34239.1 Feature: domain Description: DUF3987 Location: 21100-22120 bp Feature: domain Description: DUF3987 Location: 21 1 00-221 20 bp Feature: gene Location: 22338-22703 bp Ori: RGT34240.1 Feature: domain Description: HTH_17 Location: 22473-22611 bp Feature: domain Description: HTH_1 7 Location: 22473-2261 1 bp Feature: gene Location: 23289-24863 bp Ori: RGT34241.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 23517-24477 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2351 7-24477 bp Feature: gene Location: 25065-26123 bp Ori: RGT34242.1 Feature: domain Description: DUF772 Location: 25254-25464 bp Feature: domain Description: DUF772 Location: 25254-25464 bp Feature: domain Description: DDE_Tnp_1 Location: 25503-26073 bp Feature: domain Description: DDE_Tnp_1 Location: 25503-26073 bp Feature: gene Location: 26182-27048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), HTH_17 (pfam12728), RVT-UG2, DUF772 (pfam05598), DDE_Tnp_1 (pfam01609)

Seq: QRWP01000022.1 Bacteroides clarus strain AF19-1AC AF19-1AC.Scaf22, whole genome shotgun sequence (31749 bp)
Overview 1 RT 1: 18909-22792 bp Neighborhood of RT #1 [18909, 22791] DUF3872 Toprim_2 RVT-GII Intron_maturas2 dnaG Feature: gene Location: 18909-19412 bp Ori: RGT28911.1 Feature: domain Description: DUF3872 Location: 18960-19347 bp Feature: domain Description: DUF3872 Location: 18960-19347 bp Feature: gene Location: 19409-20131 bp Ori: RGT28912.1 Feature: domain Description: Toprim_2 Location: 19823-20078 bp Feature: domain Description: Toprim_2 Location: 1982 3-2 0078 bp Feature: gene Location: 20247-22055 bp Ori: RGT28913.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20511-21333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0511-2 1333 bp Feature: domain Description: Intron_maturas2 Location: 21429-21714 bp Feature: domain Description: Intron_maturas2 Location: 2 142 9-2 1714 bp Feature: gene Location: 22090-22509 bp Feature: gene Location: 22615-22791 bp Feature: domain Description: dnaG Location: 22693-22792 bp Feature: domain Description: dnaG Location: 2 2 693-2 2 792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3872 (pfam12988), Toprim_2 (pfam13155), RVT-GII, Intron_maturas2 (pfam01348), dnaG (TIGR01391)

Seq: QRWP01000033.1 Bacteroides clarus strain AF19-1AC AF19-1AC.Scaf33, whole genome shotgun sequence (2430 bp)
Overview 1 RT 1: 42-1918 bp Neighborhood of RT #1 [42, 2292] RVT_N RVT-GII GIIM Feature: gene Location: 42-341 bp Feature: gene Location: 637-2292 bp Ori: RGT28317.1 Gene: ltrA Feature: domain Description: RVT_N Location: 694-931 bp Feature: domain Description: RVT_N Location: 694-93 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982-1630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982-163 0 bp Feature: domain Description: GIIM Note: maturase Location: 1687-1918 bp Feature: domain Description: GIIM Note: maturase Location: 1687-1918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QRWP01000032.1 Bacteroides clarus strain AF19-1AC AF19-1AC.Scaf32, whole genome shotgun sequence (2473 bp)
Overview 1 RT 1: 686-2473 bp Neighborhood of RT #1 [686, 2473] RVT_N RVT-GII GIIM Feature: gene Location: 686-2353 bp Ori: RGT28335.1 Gene: ltrA Feature: domain Description: RVT_N Location: 740-983 bp Feature: domain Description: RVT_N Location: 74 0-983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028-1676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028-1676 bp Feature: domain Description: GIIM Note: maturase Location: 1730-1961 bp Feature: domain Description: GIIM Note: maturase Location: 1730-1961 bp Feature: gene Location: 2355-2473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QRWP01000016.1 Bacteroides clarus strain AF19-1AC AF19-1AC.Scaf16, whole genome shotgun sequence (61865 bp)
Overview 1 RT 1: 24-7227 bp Neighborhood of RT #1 [24, 7226] COG4646 RVT-GII Intron_maturas2 N6_Mtase COG4646 Feature: gene Location: 24-1532 bp Feature: domain Description: COG4646 Location: 27-1149 bp Feature: domain Description: COG4646 Location: 27-1149 bp Feature: gene Location: 1651-3456 bp Ori: RGT29672.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1915-2737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1915 -2737 bp Feature: domain Description: Intron_maturas2 Location: 2815-3133 bp Feature: domain Description: Intron_maturas2 Location: 2815 -3133 bp Feature: gene Location: 3486-3839 bp Feature: gene Location: 4029-7226 bp Feature: domain Description: N6_Mtase Location: 4341-4941 bp Feature: domain Description: N6_Mtase Location: 4341-4941 bp Feature: domain Description: COG4646 Location: 6291-7227 bp Feature: domain Description: COG4646 Location: 6291-7227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), N6_Mtase (pfam02384)