myRT

myRT report for GCA_003459705.1_ASM345970v1

Download annotations/find similar RTs

Seq: QRWQ01000006.1 [Ruminococcus] gnavus strain AF19-16AC AF19-16AC.Scaf6, whole genome shotgun sequence (186071 bp)
Overview 1 RT 1: 18310-23368 bp Neighborhood of RT #1 [18310, 23368] RVT-DGRs PHA00430 Feature: gene Location: 18310-18501 bp Feature: gene Location: 18640-18936 bp Feature: gene Location: 18920-20191 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 19220-19880 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 9220-1 9880 bp Feature: gene Location: 20701-23040 bp Feature: domain Description: PHA00430 Location: 21124-21667 bp Feature: domain Description: PHA00430 Location: 21 1 24-21 667 bp Feature: gene Location: 23033-23368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, PHA00430 (tail fiber protein)

Seq: QRWQ01000014.1 [Ruminococcus] gnavus strain AF19-16AC AF19-16AC.Scaf14, whole genome shotgun sequence (61290 bp)
Overview 1 RT 1: 30755-35711 bp Neighborhood of RT #1 [30755, 36136] RVT-DGRs DUF3751 DUF2313 Feature: gene Location: 30755-31069 bp Feature: gene Location: 31433-31726 bp Feature: gene Location: 31674-32924 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31878-32637 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31878-32 637 bp Feature: gene Location: 33430-35235 bp Feature: domain Description: DUF3751 Location: 33451-33883 bp Feature: domain Description: DUF3751 Location: 33451-33883 bp Feature: gene Location: 35255-36136 bp Feature: domain Description: DUF2313 Location: 35285-35711 bp Feature: domain Description: DUF2 313 Location: 352 85-35711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF3751 (pfam12571), DUF2313 (pfam10076)

Seq: QRWQ01000008.1 [Ruminococcus] gnavus strain AF19-16AC AF19-16AC.Scaf8, whole genome shotgun sequence (145206 bp)
Overview 1 RT 1: 27599-30977 bp Neighborhood of RT #1 [27599, 31483] TRIQK RVT-DGRs Avd_like pfam03781 Feature: gene Location: 27599-27934 bp Feature: domain Description: TRIQK Location: 27605-27719 bp Feature: domain Description: TRIQK Location: 27605-27719 bp Feature: gene Location: 27947-28252 bp Feature: gene Location: 28271-29554 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 28478-29144 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 28478-29144 bp Feature: gene Location: 29945-30334 bp Feature: domain Description: Avd_like Location: 30002-30323 bp Feature: domain Description: Avd_like Location: 3 0002-3 03 23 bp Feature: gene Location: 30413-31483 bp Feature: domain Description: pfam03781 Location: 30617-30977 bp Feature: domain Description: pfam03 781 Location: 3 0617-3 0977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TRIQK (pfam15168), RVT-DGRs, Avd_like (cd16376), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: QRWQ01000001.1 [Ruminococcus] gnavus strain AF19-16AC AF19-16AC.Scaf1, whole genome shotgun sequence (463412 bp)
Overview 1 RT 1: 273918-279348 bp Neighborhood of RT #1 [273918, 279380] Maff2 TraG-D_C RVT-GII VirD4 VirD4 DUF3801 Feature: gene Location: 273918-274139 bp Feature: domain Description: Maff2 Location: 273927-274134 bp Feature: domain Description: Maff2 Location: 273927-274 134 bp Feature: gene Location: 274255-275286 bp Feature: domain Description: TraG-D_C Location: 274732-275086 bp Feature: domain Description: TraG-D_C Location: 274 732-275086 bp Feature: gene Location: 275421-277328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275751-276495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275751-2764 95 bp Feature: gene Location: 277987-278892 bp Feature: domain Description: VirD4 Location: 278260-278614 bp Feature: domain Description: VirD4 Location: 278260-278614 bp Feature: domain Description: VirD4 Location: 278701-278854 bp Feature: domain Description: VirD4 Location: 278701-278854 bp Feature: gene Location: 278889-279380 bp Feature: domain Description: DUF3801 Location: 278955-279348 bp Feature: domain Description: DUF3801 Location: 278955-27934 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), TraG-D_C (pfam12696), RVT-GII, VirD4 (COG3505), DUF3801 (pfam12687)