myRT

myRT report for GCA_003460185.1_ASM346018v1

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Seq: QRWN01000013.1 Bacteroides stercoris strain AF19-2 AF19-2.Scaf13, whole genome shotgun sequence (84330 bp)
Overview 1 RT 1: 22473-33267 bp Neighborhood of RT #1 [22473, 33335] N6_Mtase COG4646 RVT_N RVT-GII GIIM Spc7 PRK13351 Feature: gene Location: 22473-27161 bp Feature: domain Description: N6_Mtase Location: 22785-23388 bp Feature: domain Description: N6_Mtase Location: 22785-23388 bp Feature: domain Description: COG4646 Location: 24717-26778 bp Feature: domain Description: COG4646 Location: 2471 7-26778 bp Feature: gene Location: 27649-27852 bp Feature: gene Location: 27818-29485 bp Feature: RT Description: RVT_N Location: 27872-28115 bp Feature: RT Description: RVT_N Location: 27872-281 1 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28160-28808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281 60-28808 bp Feature: domain Description: GIIM Note: maturase Location: 28862-29093 bp Feature: domain Description: GIIM Note: maturase Location: 28862-29093 bp Feature: gene Location: 29487-30752 bp Feature: domain Description: Spc7 Location: 30363-30630 bp Feature: domain Description: Spc7 Location: 30363-30630 bp Feature: gene Location: 31410-33335 bp Feature: domain Description: PRK13351 Location: 31413-33267 bp Feature: domain Description: PRK1 3351 Location: 31 41 3-33267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Spc7 (smart00787), PRK13351 (elongation factor G-like protein)

Seq: QRWN01000025.1 Bacteroides stercoris strain AF19-2 AF19-2.Scaf25, whole genome shotgun sequence (55714 bp)
Overview 1 RT 1: 51057-55437 bp Neighborhood of RT #1 [51057, 55622] OafA M20_pepD RVT-GII GIIM Feature: gene Location: 51057-52181 bp Feature: domain Description: OafA Location: 51093-52167 bp Feature: domain Description: OafA Location: 51093-52 167 bp Feature: gene Location: 52266-53723 bp Feature: domain Description: M20_pepD Location: 52293-53709 bp Feature: domain Description: M2 0_pepD Location: 52 2 93-53709 bp Feature: gene Location: 54225-55622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54561-55179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54561-55179 bp Feature: domain Description: GIIM Note: maturase Location: 55233-55437 bp Feature: domain Description: GIIM Note: maturase Location: 552 33-55437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OafA (COG1835), M20_pepD (cd03890), RVT-GII, GIIM (pfam08388)

Seq: QRWN01000005.1 Bacteroides stercoris strain AF19-2 AF19-2.Scaf5, whole genome shotgun sequence (155087 bp)
Overview 1 RT 1: 6935-9792 bp Neighborhood of RT #1 [6935, 9792] RVT-DGRs Feature: gene Location: 6935-7456 bp Feature: gene Location: 7475-7948 bp Feature: gene Location: 8154-9140 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8364-8949 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 83 64-8949 bp Feature: gene Location: 9124-9441 bp Feature: gene Location: 9556-9792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: QRWN01000015.1 Bacteroides stercoris strain AF19-2 AF19-2.Scaf15, whole genome shotgun sequence (83215 bp)
Overview 1 RT 1: 56183-65787 bp Neighborhood of RT #1 [56183, 65787] RVT-DGRs Feature: gene Location: 56183-56371 bp Feature: gene Location: 56397-62948 bp Feature: gene Location: 63432-64733 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 63645-64239 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6364 5-64 239 bp Feature: gene Location: 64735-65223 bp Feature: gene Location: 65479-65787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs