myRT

myRT report for GCA_003460245.1_ASM346024v1

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Seq: QRXD01000016.1 Escherichia coli strain AF18-23LB AF18-23LB.Scaf16, whole genome shotgun sequence (100953 bp)
Overview 1 RT 1: 13564-17441 bp Neighborhood of RT #1 [13564, 17446] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 13564-14018 bp Feature: domain Description: dut Location: 13567-13951 bp Feature: domain Description: dut Location: 1 3567-1 3951 bp Feature: gene Location: 14125-14720 bp Feature: domain Description: slmA Location: 14131-14218 bp Feature: domain Description: slmA Location: 1 41 31 -1 421 8 bp Feature: gene Location: 14766-15725 bp Ori: RGT80062.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14901-15450 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4901 -1 5450 bp Feature: gene Location: 16023-16664 bp Ori: RGT80063.1 Feature: domain Description: pyrE Location: 16026-16659 bp Feature: domain Description: pyrE Location: 1 6026-1 6659 bp Feature: gene Location: 16730-17446 bp Ori: RGT80064.1 Feature: domain Description: rph Location: 16733-17441 bp Feature: domain Description: rph Location: 1 6733-1 7441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: QRXD01000061.1 Escherichia coli strain AF18-23LB AF18-23LB.Scaf61, whole genome shotgun sequence (14281 bp)
Overview 1 RT 1: 1905-5905 bp Neighborhood of RT #1 [1905, 5913] DcuC RVT-GII RVT-GII Asparaginase_2 Feature: gene Location: 1905-3266 bp Ori: RGT74318.1 Feature: domain Description: DcuC Location: 1908-3240 bp Feature: domain Description: DcuC Location: 1908-32 40 bp Feature: gene Location: 3319-3546 bp Feature: gene Location: 3912-4358 bp Ori: RGT74319.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4218-4320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 18-432 0 bp Feature: gene Location: 4310-4474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4313-4469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4313-4469 bp Feature: gene Location: 4501-4724 bp Feature: gene Location: 4882-5913 bp Ori: RGT74320.1 Feature: domain Description: Asparaginase_2 Location: 4972-5905 bp Feature: domain Description: Asparaginase_2 Location: 4972 -5905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112)