myRT

myRT report for GCA_003460565.1_ASM346056v1

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Seq: QTVL01000002.1 Blautia sp. AF32-4BH AF32-4BH.Scaf2, whole genome shotgun sequence (417235 bp)
Overview 1 RT 1: 227196-239918 bp 2 RT 2: 297641-313188 bp Neighborhood of RT #1 [227196, 239932] DUF3848 DUF3849 COG4646 KOG1000 RVT-GII YtxK COG4646 TTRAP Neighborhood of RT #2 [297641, 313286] ArdC LPD28 YodL LPD18 DUF3849 LPD16 RVT_N RVT-GII GIIM AdoMet_MTases COG4646 KOG1000 PhdYeFM_antitox Feature: gene Location: 227196-228014 bp Ori: RGF68773.1 Feature: domain Description: DUF3848 Location: 227214-227493 bp Feature: domain Description: DUF3848 Location: 22721 4-227493 bp Feature: domain Description: DUF3849 Location: 227529-227892 bp Feature: domain Description: DUF3849 Location: 227529-227892 bp Feature: gene Location: 228016-229968 bp Ori: RGF68934.1 Feature: domain Description: COG4646 Location: 228019-228526 bp Feature: domain Description: COG4646 Location: 22801 9-228526 bp Feature: domain Description: KOG1000 Location: 228964-229168 bp Feature: domain Description: KOG1 000 Location: 228964-2291 68 bp Feature: gene Location: 230220-232115 bp Ori: RGF68774.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230514-231228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23051 4-231 228 bp Feature: gene Location: 232877-239638 bp Feature: domain Description: YtxK Location: 236912-237566 bp Feature: domain Description: YtxK Location: 23691 2-237566 bp Feature: domain Description: COG4646 Location: 237638-239639 bp Feature: domain Description: COG4646 Location: 237638-239639 bp Feature: gene Location: 239717-239932 bp Ori: RGF68775.1 Feature: domain Description: TTRAP Location: 239729-239918 bp Feature: domain Description: TTRAP Location: 239729-23991 8 bp Feature: gene Location: 297641-302383 bp Ori: RGF68841.1 Feature: domain Description: ArdC Location: 297851-298433 bp Feature: domain Description: ArdC Location: 297851 -298433 bp Feature: domain Description: LPD28 Location: 298595-298868 bp Feature: domain Description: LPD28 Location: 298595-298868 bp Feature: domain Description: YodL Location: 298970-299267 bp Feature: domain Description: YodL Location: 298970-299267 bp Feature: domain Description: LPD18 Location: 299315-299555 bp Feature: domain Description: LPD1 8 Location: 29931 5-299555 bp Feature: domain Description: DUF3849 Location: 299615-299990 bp Feature: domain Description: DUF3849 Location: 29961 5-299990 bp Feature: domain Description: LPD16 Location: 300314-300554 bp Feature: domain Description: LPD1 6 Location: 30031 4-300554 bp Feature: gene Location: 302527-303504 bp Feature: gene Location: 303505-305175 bp Ori: RGF68937.1 Gene: ltrA Feature: domain Description: RVT_N Location: 303550-303793 bp Feature: domain Description: RVT_N Location: 303550-303793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303838-304486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303838-304486 bp Feature: domain Description: GIIM Note: maturase Location: 304540-304771 bp Feature: domain Description: GIIM Note: maturase Location: 304540-304771 bp Feature: gene Location: 305753-312925 bp Ori: RGF68842.1 Feature: domain Description: AdoMet_MTases Location: 309326-309674 bp Feature: domain Description: AdoMet_MTases Location: 309326-309674 bp Feature: domain Description: COG4646 Location: 309872-312428 bp Feature: domain Description: COG4646 Location: 309872-31 2428 bp Feature: domain Description: KOG1000 Location: 312782-312908 bp Feature: domain Description: KOG1 000 Location: 31 2782-31 2908 bp Feature: gene Location: 313023-313286 bp Ori: RGF68843.1 Feature: domain Description: PhdYeFM_antitox Location: 313035-313188 bp Feature: domain Description: PhdYeFM_antitox Location: 31 3035-31 31 88 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3848 (pfam12959), DUF3849 (pfam12960), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, YtxK (COG0827), TTRAP (pfam14203), ArdC (COG4227), LPD28 (pfam18843), YodL (pfam14191)
LPD18 (pfam18832), LPD16 (pfam18830), RVT_N (pfam13655), GIIM (pfam08388), AdoMet_MTases (cl17173), PhdYeFM_antitox (pfam02604)

Seq: QTVL01000006.1 Blautia sp. AF32-4BH AF32-4BH.Scaf6, whole genome shotgun sequence (238490 bp)
Overview 1 RT 1: 34427-37049 bp Neighborhood of RT #1 [34427, 37049] rhamnu_1P_ald RVT-GII ParB_N_like Feature: gene Location: 34427-34969 bp Feature: domain Description: rhamnu_1P_ald Location: 34430-34958 bp Feature: domain Description: rhamnu_1P_ald Location: 34430-34958 bp Feature: gene Location: 35060-35317 bp Feature: gene Location: 35885-36049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35897-36020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35897-3602 0 bp Feature: gene Location: 36404-36697 bp Ori: RGF66967.1 Feature: domain Description: ParB_N_like Location: 36431-36686 bp Feature: domain Description: ParB_N_like Location: 36431-36686 bp Feature: gene Location: 36852-37049 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rhamnu_1P_ald (TIGR02624), RVT-GII, ParB_N_like (cd16411)

Seq: QTVL01000007.1 Blautia sp. AF32-4BH AF32-4BH.Scaf7, whole genome shotgun sequence (222887 bp)
Overview 1 RT 1: 32234-39181 bp Neighborhood of RT #1 [32234, 39181] TnpB_IS66 RVT-GII GIIM RVT_N RVT-GII GIIM AAAA Feature: gene Location: 32234-32395 bp Ori: RGF66597.1 Feature: domain Description: TnpB_IS66 Location: 32261-32360 bp Feature: domain Description: TnpB_IS66 Location: 3 2261-3 23 60 bp Feature: gene Location: 32587-32718 bp Feature: gene Location: 32917-34200 bp Ori: RGF66598.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33127-33742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 127-3 3 742 bp Feature: domain Description: GIIM Note: maturase Location: 33802-34033 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 802-3 403 3 bp Feature: gene Location: 34430-35938 bp Ori: RGF66599.1 Gene: ltrA Feature: domain Description: RVT_N Location: 34487-34730 bp Feature: domain Description: RVT_N Location: 3 4487-3 473 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34790-35435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 4790-3 543 5 bp Feature: domain Description: GIIM Note: maturase Location: 35486-35720 bp Feature: domain Description: GIIM Note: maturase Location: 3 5486-3 5720 bp Feature: gene Location: 36870-38267 bp Ori: RGF66600.1 Feature: domain Description: AAAA Location: 36879-38097 bp Feature: domain Description: AAAA Location: 3 6879-3 8097 bp Feature: gene Location: 38639-39181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-GII, GIIM (pfam08388), RVT_N (pfam13655), AAAA (COG1672)

Seq: QTVL01000003.1 Blautia sp. AF32-4BH AF32-4BH.Scaf3, whole genome shotgun sequence (354714 bp)
Overview 1 RT 1: 273377-278325 bp Neighborhood of RT #1 [273377, 278603] LacZ PRK10572 PRK10572 RVT-GII PolyPPase_VTC_like DUF4956 Feature: gene Location: 273377-275095 bp Ori: RGF68299.1 Feature: domain Description: LacZ Location: 273428-274694 bp Feature: domain Description: LacZ Location: 2734 28-274 694 bp Feature: gene Location: 275191-276084 bp Ori: RGF68300.1 Feature: domain Description: PRK10572 Location: 275398-275533 bp Feature: domain Description: PRK10572 Location: 275398-275533 bp Feature: domain Description: PRK10572 Location: 275734-276058 bp Feature: domain Description: PRK10572 Location: 275734 -276058 bp Feature: gene Location: 276542-276679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276545-276677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27654 5-276677 bp Feature: gene Location: 277219-277914 bp Ori: RGF68301.1 Feature: domain Description: PolyPPase_VTC_like Location: 277237-277879 bp Feature: domain Description: PolyPPase_VTC_like Location: 277237-277879 bp Feature: gene Location: 277926-278603 bp Ori: RGF68302.1 Feature: domain Description: DUF4956 Location: 278016-278325 bp Feature: domain Description: DUF4 956 Location: 278016-278325 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacZ (COG3250), PRK10572 (arabinose operon transcriptional regulator AraC), RVT-GII, PolyPPase_VTC_like (cd07750), DUF4956 (pfam16316)