myRT

myRT report for GCA_003460605.1_ASM346060v1

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Seq: QTVN01000009.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf9, whole genome shotgun sequence (233331 bp)
Overview 1 RT 1: 232360-233281 bp Neighborhood of RT #1 [232360, 233280] rpsI RVT-GII Feature: gene Location: 232360-232752 bp Feature: domain Description: rpsI Location: 232369-232750 bp Feature: domain Description: rpsI Location: 232369-232750 bp Feature: gene Location: 232707-232847 bp Feature: gene Location: 233065-233280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 233068-233281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 233068-233281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsI (PRK00132), RVT-GII

Seq: QTVN01000011.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf11, whole genome shotgun sequence (163099 bp)
Overview 1 RT 1: 105108-109222 bp Neighborhood of RT #1 [105108, 109477] PurR RVT-GII GIIM RAYT DDE_Tnp_IS66 Feature: gene Location: 105108-106130 bp Feature: domain Description: PurR Location: 105120-106122 bp Feature: domain Description: PurR Location: 10512 0-10612 2 bp Feature: gene Location: 106510-106695 bp Feature: gene Location: 107050-108354 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107251-107869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1072 51-107869 bp Feature: domain Description: GIIM Note: maturase Location: 107923-108139 bp Feature: domain Description: GIIM Note: maturase Location: 10792 3-108139 bp Feature: gene Location: 108499-108954 bp Feature: domain Description: RAYT Location: 108520-108895 bp Feature: domain Description: RAYT Location: 10852 0-108895 bp Feature: gene Location: 109141-109477 bp Feature: domain Description: DDE_Tnp_IS66 Location: 109144-109222 bp Feature: domain Description: DDE_Tnp_IS66 Location: 109144-1092 2 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PurR (COG1609), RVT-GII, GIIM (pfam08388), RAYT (COG1943), DDE_Tnp_IS66 (pfam03050)

Seq: QTVN01000001.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf1, whole genome shotgun sequence (530243 bp)
Overview 1 RT 1: 389323-398071 bp Neighborhood of RT #1 [389323, 398109] DDE_5 MATE_yoeA_like RVT-GII RVT-GII GIIM COG3547 YhcG Feature: gene Location: 389323-390437 bp Feature: domain Description: DDE_5 Location: 389353-389830 bp Feature: domain Description: DDE_5 Location: 3 893 53 -3 8983 0 bp Feature: gene Location: 391059-392417 bp Feature: domain Description: MATE_yoeA_like Location: 391107-392388 bp Feature: domain Description: MATE_yoeA_like Location: 3 91107-3 923 88 bp Feature: gene Location: 392728-393390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 393046-393388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 93 046-3 93 3 88 bp Feature: gene Location: 393402-393594 bp Feature: gene Location: 393748-395043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394006-394690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 94006-3 94690 bp Feature: domain Description: GIIM Note: maturase Location: 394756-394975 bp Feature: domain Description: GIIM Note: maturase Location: 3 94756-3 94975 bp Feature: gene Location: 395801-397090 bp Feature: domain Description: COG3547 Location: 395858-397001 bp Feature: domain Description: COG3 547 Location: 3 95858-3 97001 bp Feature: gene Location: 397273-398109 bp Feature: domain Description: YhcG Location: 397600-398071 bp Feature: domain Description: YhcG Location: 3 97600-3 98071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_5 (pfam13546), MATE_yoeA_like (cd13138), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), YhcG (COG4804)

Seq: QTVN01000010.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf10, whole genome shotgun sequence (205140 bp)
Overview 1 RT 1: 203459-204988 bp Neighborhood of RT #1 [203459, 205059] PRK10514 RAYT RVT-GII GIIM Feature: gene Location: 203459-203698 bp Feature: domain Description: PRK10514 Location: 203471-203693 bp Feature: domain Description: PRK10514 Location: 2034 71-203693 bp Feature: gene Location: 203838-204209 bp Feature: domain Description: RAYT Location: 203841-204177 bp Feature: domain Description: RAYT Location: 20384 1-204 177 bp Feature: gene Location: 204439-205059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204442-204703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204 4 4 2-204 703 bp Feature: domain Description: GIIM Note: maturase Location: 204757-204988 bp Feature: domain Description: GIIM Note: maturase Location: 204 757-204 988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10514 (putative acetyltransferase; Provisional), RAYT (COG1943), RVT-GII, GIIM (pfam08388)

Seq: QTVN01000036.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf36, whole genome shotgun sequence (4620 bp)
Overview 1 RT 1: 333-4202 bp Neighborhood of RT #1 [333, 4264] RVT_N RVT-GII xerC INT_RitB_C_like Feature: gene Location: 333-599 bp Feature: gene Location: 1447-2241 bp Feature: RT Description: RVT_N Location: 1513-1756 bp Feature: RT Description: RVT_N Location: 15 13-175 6 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1804-2173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1804-2173 bp Feature: gene Location: 2286-3300 bp Feature: domain Description: xerC Location: 2313-3021 bp Feature: domain Description: xerC Location: 2313-3021 bp Feature: gene Location: 3281-4264 bp Feature: domain Description: INT_RitB_C_like Location: 3617-4202 bp Feature: domain Description: INT_RitB_C_like Location: 3617-4202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, xerC (PRK01287), INT_RitB_C_like (cd00797)

Seq: QTVN01000022.1 Ruminococcus sp. AF31-8BH AF31-8BH.Scaf22, whole genome shotgun sequence (67592 bp)
Overview 1 RT 1: 140-3376 bp Neighborhood of RT #1 [140, 3402] RVT-GII ManC rSAM_mob_pairB Feature: gene Location: 140-1405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389-1052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 389-1052 bp Feature: gene Location: 2037-2390 bp Feature: domain Description: ManC Location: 2163-2355 bp Feature: domain Description: ManC Location: 216 3-2355 bp Feature: gene Location: 2494-3402 bp Feature: domain Description: rSAM_mob_pairB Location: 2524-3376 bp Feature: domain Description: rSAM_mob_pairB Location: 2524-3376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, ManC (COG0662), rSAM_mob_pairB (TIGR04470)