myRT

myRT report for GCA_003460685.1_ASM346068v1

Download annotations/find similar RTs

Seq: QTVR01000009.1 Blautia sp. OF03-13 OF03-13.Scaf9, whole genome shotgun sequence (161298 bp)
Overview 1 RT 1: 128172-130158 bp Neighborhood of RT #1 [128172, 130158] ParB_N_like RVT-GII Feature: gene Location: 128172-128369 bp Feature: gene Location: 128524-128817 bp Ori: RGF82132.1 Feature: domain Description: ParB_N_like Location: 128551-128806 bp Feature: domain Description: ParB_N_like Location: 1 28551 -1 28806 bp Feature: gene Location: 129171-129335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129183-129306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 291 83-1 29306 bp Feature: gene Location: 129547-129885 bp Feature: gene Location: 129943-130158 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParB_N_like (cd16411), RVT-GII

Seq: QTVR01000008.1 Blautia sp. OF03-13 OF03-13.Scaf8, whole genome shotgun sequence (174833 bp)
Overview 1 RT 1: 177-5465 bp Neighborhood of RT #1 [177, 5628] AAAA RVT-GII GIIM BaeS OmpR Feature: gene Location: 177-755 bp Feature: gene Location: 1103-2499 bp Feature: domain Description: AAAA Location: 1112-1703 bp Feature: domain Description: AAAA Location: 1112 -1703 bp Feature: gene Location: 2727-3290 bp Ori: RGF82290.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2733-2934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 733-2 934 bp Feature: domain Description: GIIM Note: maturase Location: 2994-3219 bp Feature: domain Description: GIIM Note: maturase Location: 2 994-32 19 bp Feature: gene Location: 3813-4985 bp Ori: RGF82291.1 Feature: domain Description: BaeS Location: 4080-4977 bp Feature: domain Description: BaeS Location: 4080-4977 bp Feature: gene Location: 4982-5628 bp Feature: domain Description: OmpR Location: 4991-5465 bp Feature: domain Description: OmpR Location: 4991-5465 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAAA (COG1672), RVT-GII, GIIM (pfam08388), BaeS (COG0642), OmpR (COG0745)

Seq: QTVR01000006.1 Blautia sp. OF03-13 OF03-13.Scaf6, whole genome shotgun sequence (190557 bp)
Overview 1 RT 1: 15144-25009 bp Neighborhood of RT #1 [15144, 25038] RVT-GII sortase_fam IscR HDGYP Feature: gene Location: 15144-15566 bp Feature: gene Location: 15643-15897 bp Feature: gene Location: 15882-16778 bp Ori: RGF82942.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16092-16269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16092-16269 bp Feature: domain Description: sortase_fam Location: 16269-16620 bp Feature: domain Description: sortase_fam Location: 16269-16620 bp Feature: gene Location: 17448-23577 bp Feature: gene Location: 23590-25038 bp Ori: RGF82943.1 Feature: domain Description: IscR Location: 23593-23992 bp Feature: domain Description: IscR Location: 23 593 -23 992 bp Feature: domain Description: HDGYP Location: 24211-25009 bp Feature: domain Description: HDGYP Location: 24211-25009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, sortase_fam (TIGR01076), IscR (TIGR02010), HDGYP (COG2206)

Seq: QTVR01000002.1 Blautia sp. OF03-13 OF03-13.Scaf2, whole genome shotgun sequence (273237 bp)
Overview 1 RT 1: 270082-273059 bp Neighborhood of RT #1 [270082, 273175] Y1_Tnp InsQ RVT-GII Feature: gene Location: 270082-270519 bp Ori: RGF84644.1 Gene: tnpA Feature: domain Description: Y1_Tnp Location: 270115-270469 bp Feature: domain Description: Y1_Tnp Location: 270115-2704 69 bp Feature: gene Location: 270500-271603 bp Ori: RGF84645.1 Feature: domain Description: InsQ Location: 270509-271580 bp Feature: domain Description: InsQ Location: 270509-271580 bp Feature: gene Location: 272231-273175 bp Ori: RGF84646.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 272444-273059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2724 4 4 -273059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), InsQ (COG0675), RVT-GII