myRT

myRT report for GCA_003460825.1_ASM346082v1

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Seq: QTVX01000002.1 Ruminococcus sp. AM49-10BH AM49-10BH.Scaf2, whole genome shotgun sequence (230835 bp)
Overview 1 RT 1: 204891-209030 bp Neighborhood of RT #1 [204891, 209419] AcrR Acetyltransf_7 RVT-GII SSB Feature: gene Location: 204891-205496 bp Ori: RGG03825.1 Feature: domain Description: AcrR Location: 204933-205413 bp Feature: domain Description: AcrR Location: 204933-20541 3 bp Feature: gene Location: 205525-205968 bp Ori: RGG03865.1 Feature: domain Description: Acetyltransf_7 Location: 205624-205867 bp Feature: domain Description: Acetyltransf_7 Location: 205624-205867 bp Feature: gene Location: 206459-207754 bp Ori: RGG03826.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 206714-207404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20671 4-207404 bp Feature: gene Location: 207899-208108 bp Feature: gene Location: 208730-209419 bp Ori: RGG03828.1 Feature: domain Description: SSB Location: 208733-209030 bp Feature: domain Description: SSB Location: 208733-209030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), Acetyltransf_7 (pfam13508), RVT-GII, SSB (pfam00436)

Seq: QTVX01000025.1 Ruminococcus sp. AM49-10BH AM49-10BH.Scaf25, whole genome shotgun sequence (42415 bp)
Overview 1 RT 1: 16806-27649 bp Neighborhood of RT #1 [16806, 27660] HDGYP SpaA CollagenBindB SpaA RVT-GII IscR HDGYP Feature: gene Location: 16806-17907 bp Feature: domain Description: HDGYP Location: 17076-17859 bp Feature: domain Description: HDGYP Location: 17076-17859 bp Feature: gene Location: 17920-24051 bp Ori: RGF99313.1 Feature: domain Description: SpaA Location: 22372-22576 bp Feature: domain Description: SpaA Location: 2 2 372 -2 2 576 bp Feature: domain Description: CollagenBindB Location: 22750-22978 bp Feature: domain Description: CollagenBindB Location: 2 2 750-2 2 978 bp Feature: domain Description: SpaA Location: 23167-23422 bp Feature: domain Description: SpaA Location: 2 3167-2 342 2 bp Feature: gene Location: 24672-25145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24918-25140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4918-2 5140 bp Feature: gene Location: 25748-26068 bp Feature: gene Location: 26200-27660 bp Ori: RGF99315.1 Feature: domain Description: IscR Location: 26203-26605 bp Feature: domain Description: IscR Location: 2 62 03-2 6605 bp Feature: domain Description: HDGYP Location: 26902-27649 bp Feature: domain Description: HDGYP Location: 2 6902 -2 7649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HDGYP (COG2206), SpaA (pfam17802), CollagenBindB (cl15753), RVT-GII, IscR (TIGR02010)

Seq: QTVX01000011.1 Ruminococcus sp. AM49-10BH AM49-10BH.Scaf11, whole genome shotgun sequence (94069 bp)
Overview 1 RT 1: 2436-6499 bp Neighborhood of RT #1 [2436, 6729] HTH_32 rve RVT-GII GIIM WcaA NapF FrhB_FdhB_N FrhB_FdhB_C Feature: gene Location: 2436-2633 bp Feature: gene Location: 2927-4192 bp Ori: RGG01579.1 Feature: domain Description: HTH_32 Location: 3110-3335 bp Feature: domain Description: HTH_3 2 Location: 3 110-3 3 3 5 bp Feature: domain Description: rve Location: 3413-3758 bp Feature: domain Description: rve Location: 3 413 -3 758 bp Feature: gene Location: 4566-5186 bp Ori: RGG01580.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4575-4824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4575-4824 bp Feature: domain Description: GIIM Note: maturase Location: 4890-5097 bp Feature: domain Description: GIIM Note: maturase Location: 4890-5097 bp Feature: gene Location: 5131-5337 bp Ori: RGG01581.1 Feature: domain Description: WcaA Location: 5134-5323 bp Feature: domain Description: WcaA Location: 513 4-53 23 bp Feature: gene Location: 5608-6729 bp Ori: RGG01582.1 Feature: domain Description: NapF Location: 5617-5797 bp Feature: domain Description: NapF Location: 5617-5797 bp Feature: domain Description: FrhB_FdhB_N Location: 5818-6007 bp Feature: domain Description: FrhB_FdhB_N Location: 5818-6007 bp Feature: domain Description: FrhB_FdhB_C Location: 6058-6499 bp Feature: domain Description: FrhB_FdhB_C Location: 6058-6499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), rve (pfam00665), RVT-GII, GIIM (pfam08388), WcaA (TIGR04017), NapF (COG1145), FrhB_FdhB_N (pfam04422), FrhB_FdhB_C (pfam04432)