myRT

myRT report for GCA_003460955.1_ASM346095v1

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Seq: QTWD01000018.1 Blautia sp. AF26-2 AF26-2.Scaf18, whole genome shotgun sequence (39033 bp)
Overview 1 RT 1: 32915-38875 bp Neighborhood of RT #1 [32915, 38875] HTH_XRE RVT-GII GIIM HTH_XRE HTH_XRE TPR Feature: gene Location: 32915-33562 bp Ori: RGG13944.1 Feature: domain Description: HTH_XRE Location: 33368-33542 bp Feature: domain Description: HTH_XRE Location: 33368-33542 bp Feature: gene Location: 33693-34295 bp Feature: gene Location: 34751-36034 bp Ori: RGG13946.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34961-35576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34961 -35576 bp Feature: domain Description: GIIM Note: maturase Location: 35636-35867 bp Feature: domain Description: GIIM Note: maturase Location: 35636-35867 bp Feature: gene Location: 36340-38127 bp Ori: RGG13947.1 Feature: domain Description: HTH_XRE Location: 36370-36517 bp Feature: domain Description: HTH_XRE Location: 36370-3651 7 bp Feature: domain Description: HTH_XRE Location: 37255-37387 bp Feature: domain Description: HTH_XRE Location: 37255-37387 bp Feature: domain Description: TPR Location: 37618-37924 bp Feature: domain Description: TPR Location: 3761 8-37924 bp Feature: gene Location: 38255-38875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-GII, GIIM (pfam08388), TPR (smart00028)

Seq: QTWD01000016.1 Blautia sp. AF26-2 AF26-2.Scaf16, whole genome shotgun sequence (73056 bp)
Overview 1 RT 1: 35554-39983 bp Neighborhood of RT #1 [35554, 39994] Resolvase Recombinase Zn_ribbon_recom ParB_N_like RVT-GII rhamnu_1P_ald Feature: gene Location: 35554-37293 bp Feature: domain Description: Resolvase Location: 35632-36073 bp Feature: domain Description: Resolvase Location: 35632 -36073 bp Feature: domain Description: Recombinase Location: 36142-36463 bp Feature: domain Description: Recombinase Location: 36142 -36463 bp Feature: domain Description: Zn_ribbon_recom Location: 36529-36712 bp Feature: domain Description: Zn_ribbon_recom Location: 3652 9-36712 bp Feature: gene Location: 37724-38017 bp Ori: RGG14188.1 Feature: domain Description: ParB_N_like Location: 37751-38006 bp Feature: domain Description: ParB_N_like Location: 37751-38006 bp Feature: gene Location: 38372-38536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38384-38507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38384-38507 bp Feature: gene Location: 39125-39361 bp Feature: gene Location: 39452-39994 bp Feature: domain Description: rhamnu_1P_ald Location: 39455-39983 bp Feature: domain Description: rhamnu_1P_ald Location: 39455-39983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), ParB_N_like (cd16411), RVT-GII, rhamnu_1P_ald (TIGR02624)

Seq: QTWD01000012.1 Blautia sp. AF26-2 AF26-2.Scaf12, whole genome shotgun sequence (130044 bp)
Overview 1 RT 1: 116915-123205 bp Neighborhood of RT #1 [116915, 123205] DUF4116 DUF4116 Metallophos Smc RVT-GII Peptidase_S66_mccF_like Feature: gene Location: 116915-119587 bp Ori: RGG14911.1 Feature: domain Description: DUF4116 Location: 116936-117041 bp Feature: domain Description: DUF4116 Location: 11693 6-117041 bp Feature: domain Description: DUF4116 Location: 117140-117257 bp Feature: domain Description: DUF4116 Location: 117140-117257 bp Feature: domain Description: Metallophos Location: 117917-118241 bp Feature: domain Description: Metallophos Location: 117917-118241 bp Feature: gene Location: 119772-120461 bp Feature: domain Description: Smc Location: 119778-120441 bp Feature: domain Description: Smc Location: 119778-120441 bp Feature: gene Location: 120413-121126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120668-121115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120668-121115 bp Feature: gene Location: 121647-122645 bp Ori: RGG14912.1 Feature: domain Description: Peptidase_S66_mccF_like Location: 121680-122592 bp Feature: domain Description: Peptidase_S66_mccF_like Location: 121680-122592 bp Feature: gene Location: 122780-123205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4116 (pfam13475), Metallophos (pfam00149), Smc (COG1196), RVT-GII, Peptidase_S66_mccF_like (cd07062)

Seq: QTWD01000013.1 Blautia sp. AF26-2 AF26-2.Scaf13, whole genome shotgun sequence (119163 bp)
Overview 1 RT 1: 110821-115650 bp Neighborhood of RT #1 [110821, 116051] DUF4956 PolyPPase_VTC_like RVT-GII PRK10572 PRK10572 LacZ Feature: gene Location: 110821-111498 bp Ori: RGG14635.1 Feature: domain Description: DUF4956 Location: 110911-111220 bp Feature: domain Description: DUF4 956 Location: 110911-111220 bp Feature: gene Location: 111510-112205 bp Ori: RGG14636.1 Feature: domain Description: PolyPPase_VTC_like Location: 111528-112170 bp Feature: domain Description: PolyPPase_VTC_like Location: 111528-112170 bp Feature: gene Location: 112748-112885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112751-112883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112751-112883 bp Feature: gene Location: 113344-114237 bp Ori: RGG14637.1 Feature: domain Description: PRK10572 Location: 113551-113686 bp Feature: domain Description: PRK10572 Location: 113551-113686 bp Feature: domain Description: PRK10572 Location: 113887-114211 bp Feature: domain Description: PRK10572 Location: 113887-114 211 bp Feature: gene Location: 114333-116051 bp Ori: RGG14638.1 Feature: domain Description: LacZ Location: 114384-115650 bp Feature: domain Description: LacZ Location: 114 384 -115650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4956 (pfam16316), PolyPPase_VTC_like (cd07750), RVT-GII, PRK10572 (arabinose operon transcriptional regulator AraC), LacZ (COG3250)

Seq: QTWD01000001.1 Blautia sp. AF26-2 AF26-2.Scaf1, whole genome shotgun sequence (592851 bp)
Overview 1 RT 1: 54171-58021 bp Neighborhood of RT #1 [54171, 58041] Alanine_zipper RVT-DGRs Phage_XkdX Feature: gene Location: 54171-54602 bp Ori: RGG19462.1 Feature: domain Description: Alanine_zipper Location: 54390-54501 bp Feature: domain Description: Alanine_zipper Location: 5 4390-5 45 01 bp Feature: gene Location: 54606-55901 bp Feature: gene Location: 56267-57652 bp Ori: RGG19464.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56480-57224 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5 6480-5 7224 bp Feature: gene Location: 57666-57887 bp Feature: gene Location: 57889-58041 bp Ori: RGG19466.1 Feature: domain Description: Phage_XkdX Location: 57910-58021 bp Feature: domain Description: Phage_XkdX Location: 5 7910-5 8021 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Alanine_zipper (pfam11839), RVT-DGRs, Phage_XkdX (pfam09693)