myRT

myRT report for GCA_003461925.1_ASM346192v1

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Seq: QTYA01000016.1 Ruminococcus sp. AM36-5 AM36-5.Scaf16, whole genome shotgun sequence (78584 bp)
Overview 1 RT 1: 69168-73496 bp Neighborhood of RT #1 [69168, 73615] Integrase_DNA Phage_int_SAM_4 INT_ICEBs1_C_like metG_C_term RVT-GII YbjN DUF3232 Feature: gene Location: 69168-70403 bp Ori: RGH48535.1 Feature: domain Description: Integrase_DNA Location: 69171-69345 bp Feature: domain Description: Integrase_DNA Location: 691 71 -69345 bp Feature: domain Description: Phage_int_SAM_4 Location: 69399-69636 bp Feature: domain Description: Phage_int_SAM_4 Location: 69399-69636 bp Feature: domain Description: INT_ICEBs1_C_like Location: 69741-70338 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 69741 -70338 bp Feature: gene Location: 70583-71065 bp Ori: RGH48536.1 Feature: domain Description: metG_C_term Location: 70709-71057 bp Feature: domain Description: metG_C_term Location: 70709-71 057 bp Feature: gene Location: 71338-72013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71356-71530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71 356-71 530 bp Feature: gene Location: 72601-73029 bp Ori: RGH48537.1 Feature: domain Description: YbjN Location: 72622-72934 bp Feature: domain Description: YbjN Location: 72622-72934 bp Feature: gene Location: 73211-73615 bp Ori: RGH48538.1 Feature: domain Description: DUF3232 Location: 73271-73496 bp Feature: domain Description: DUF3232 Location: 73271 -73496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Integrase_DNA (pfam02920), Phage_int_SAM_4 (pfam13495), INT_ICEBs1_C_like (cd01189), metG_C_term (TIGR00399), RVT-GII, YbjN (pfam10722), DUF3232 (pfam11554)

Seq: QTYA01000001.1 Ruminococcus sp. AM36-5 AM36-5.Scaf1, whole genome shotgun sequence (499086 bp)
Overview 1 RT 1: 359346-363058 bp Neighborhood of RT #1 [359346, 363058] P22_AR_N RVT-UG27 Feature: gene Location: 359346-360542 bp Ori: RGH54973.1 Feature: domain Description: P22_AR_N Location: 359376-359730 bp Feature: domain Description: P2 2 _AR_N Location: 359376-359730 bp Feature: gene Location: 360604-361200 bp Feature: gene Location: 361213-362484 bp Ori: RGH55135.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 361405-362044 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 361405-362 044 bp Feature: gene Location: 362484-362732 bp Feature: gene Location: 362729-363058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P22_AR_N (pfam10547), RVT-UG27

Seq: QTYA01000004.1 Ruminococcus sp. AM36-5 AM36-5.Scaf4, whole genome shotgun sequence (271540 bp)
Overview 1 RT 1: 230410-233994 bp Neighborhood of RT #1 [230410, 233994] OafA RVT-GII AbiEii Feature: gene Location: 230410-231501 bp Ori: RGH53041.1 Feature: domain Description: OafA Location: 230416-231493 bp Feature: domain Description: OafA Location: 23 0416-23 1493 bp Feature: gene Location: 231508-231963 bp Feature: gene Location: 232069-233148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 232195-232723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 2195-23 2723 bp Feature: gene Location: 233121-233387 bp Ori: RGH52988.1 Feature: domain Description: AbiEii Location: 233247-233346 bp Feature: domain Description: AbiEii Location: 23 3 247-23 3 3 46 bp Feature: gene Location: 233374-233994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OafA (COG1835), RVT-GII, AbiEii (pfam08843)