myRT

myRT report for GCA_003462165.1_ASM346216v1

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Seq: QTYM01000021.1 Blautia sp. AM28-36 AM28-36.Scaf21, whole genome shotgun sequence (50402 bp)
Overview 1 RT 1: 32781-36918 bp Neighborhood of RT #1 [32781, 36918] ParB_N_like RVT-GII GIIM Feature: gene Location: 32781-33152 bp Feature: gene Location: 33447-34826 bp Ori: RGH83864.1 Feature: domain Description: ParB_N_like Location: 33984-34239 bp Feature: domain Description: ParB_N_like Location: 33984-34239 bp Feature: gene Location: 34943-36232 bp Ori: RGH83865.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35234-35867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35234-35867 bp Feature: domain Description: GIIM Note: maturase Location: 35948-36173 bp Feature: domain Description: GIIM Note: maturase Location: 35948-361 73 bp Feature: gene Location: 36324-36518 bp Feature: gene Location: 36754-36918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParB_N_like (cd16411), RVT-GII, GIIM (pfam08388)

Seq: QTYM01000012.1 Blautia sp. AM28-36 AM28-36.Scaf12, whole genome shotgun sequence (98253 bp)
Overview 1 RT 1: 23656-28605 bp Neighborhood of RT #1 [23656, 28883] LacZ PRK10572 PRK10572 RVT-GII PolyPPase_VTC_like DUF4956 Feature: gene Location: 23656-25374 bp Ori: RGH85169.1 Feature: domain Description: LacZ Location: 23707-24973 bp Feature: domain Description: LacZ Location: 2 3707-2 4973 bp Feature: gene Location: 25470-26363 bp Ori: RGH85170.1 Feature: domain Description: PRK10572 Location: 25677-25812 bp Feature: domain Description: PRK10572 Location: 2 5677-2 5812 bp Feature: domain Description: PRK10572 Location: 26013-26337 bp Feature: domain Description: PRK10572 Location: 2 6013-2 6337 bp Feature: gene Location: 26822-26959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26825-26957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 682 5-2 6957 bp Feature: gene Location: 27499-28194 bp Ori: RGH85171.1 Feature: domain Description: PolyPPase_VTC_like Location: 27517-28159 bp Feature: domain Description: PolyPPase_VTC_like Location: 2 7517-2 8159 bp Feature: gene Location: 28206-28883 bp Ori: RGH85172.1 Feature: domain Description: DUF4956 Location: 28296-28605 bp Feature: domain Description: DUF4956 Location: 2 82 96-2 8605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacZ (COG3250), PRK10572 (arabinose operon transcriptional regulator AraC), RVT-GII, PolyPPase_VTC_like (cd07750), DUF4956 (pfam16316)

Seq: QTYM01000003.1 Blautia sp. AM28-36 AM28-36.Scaf3, whole genome shotgun sequence (347904 bp)
Overview 1 RT 1: 14854-18353 bp Neighborhood of RT #1 [14854, 18400] AAAA RVT-GII PHA02517 IstB_IS21 Feature: gene Location: 14854-15036 bp Feature: gene Location: 15145-16542 bp Ori: RGH87298.1 Feature: domain Description: AAAA Location: 15154-16372 bp Feature: domain Description: AAAA Location: 15154-163 72 bp Feature: gene Location: 17075-17488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17285-17477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17285-17477 bp Feature: gene Location: 17479-18096 bp Feature: domain Description: PHA02517 Location: 17563-18094 bp Feature: domain Description: PHA02517 Location: 17563 -18094 bp Feature: gene Location: 18089-18400 bp Ori: RGH87299.1 Feature: domain Description: IstB_IS21 Location: 18095-18353 bp Feature: domain Description: IstB_IS21 Location: 18095-183 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAAA (COG1672), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), IstB_IS21 (pfam01695)

Seq: QTYM01000001.1 Blautia sp. AM28-36 AM28-36.Scaf1, whole genome shotgun sequence (759442 bp)
Overview 1 RT 1: 442509-447955 bp Neighborhood of RT #1 [442509, 447981] SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 RVT_N RVT-GII TnpW Feature: gene Location: 442509-444392 bp Ori: RGH88986.1 Feature: domain Description: SR_TndX_transposase Location: 442536-442950 bp Feature: domain Description: SR_TndX_transposase Location: 4 4 2536-4 4 2950 bp Feature: domain Description: Recombinase Location: 443049-443418 bp Feature: domain Description: Recombinase Location: 4 4 304 9-4 4 34 18 bp Feature: domain Description: Zn_ribbon_recom Location: 443460-443643 bp Feature: domain Description: Zn_ribbon_recom Location: 4 4 34 60-4 4 364 3 bp Feature: domain Description: DUF4368 Location: 443919-444114 bp Feature: domain Description: DUF4 368 Location: 4 4 3919-4 4 4 114 bp Feature: gene Location: 444822-445154 bp Feature: gene Location: 445268-446933 bp Gene: ltrA Feature: domain Description: RVT_N Location: 445313-445556 bp Feature: domain Description: RVT_N Location: 4 4 5313-4 4 5556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445601-445916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 5601-4 4 5916 bp Feature: gene Location: 447516-447749 bp Feature: gene Location: 447796-447981 bp Ori: RGH88987.1 Feature: domain Description: TnpW Location: 447859-447955 bp Feature: domain Description: TnpW Location: 4 4 7859-4 4 7955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287), RVT_N (pfam13655), RVT-GII, TnpW (pfam14202)