myRT

myRT report for GCA_003462405.1_ASM346240v1

Download annotations/find similar RTs

Seq: QTYY01000002.1 Ruminococcus sp. TF08-4 TF08-4.Scaf2, whole genome shotgun sequence (369320 bp)
Overview 1 RT 1: 150559-153558 bp Neighborhood of RT #1 [150559, 153650] dnaG RVT-GII GIIM DUF3991 Toprim_2 DUF4368 FCS Feature: gene Location: 150559-150855 bp Feature: domain Description: dnaG Location: 150700-150838 bp Feature: domain Description: dnaG Location: 1 50700-1 50838 bp Feature: gene Location: 151090-151284 bp Feature: gene Location: 151376-152665 bp Ori: RGI21227.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151667-152300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 667-1 52300 bp Feature: domain Description: GIIM Note: maturase Location: 152381-152606 bp Feature: domain Description: GIIM Note: maturase Location: 1 52381 -1 52606 bp Feature: gene Location: 152740-153321 bp Ori: RGI21228.1 Feature: domain Description: DUF3991 Location: 152836-153037 bp Feature: domain Description: DUF3991 Location: 1 52836-1 53037 bp Feature: domain Description: Toprim_2 Location: 153070-153289 bp Feature: domain Description: Toprim_2 Location: 1 53070-1 53289 bp Feature: gene Location: 153288-153650 bp Ori: RGI21229.1 Feature: domain Description: DUF4368 Location: 153291-153396 bp Feature: domain Description: DUF4368 Location: 1 53291 -1 53396 bp Feature: domain Description: FCS Location: 153462-153558 bp Feature: domain Description: FCS Location: 1 53462-1 53558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), RVT-GII, GIIM (pfam08388), DUF3991 (pfam13154), Toprim_2 (pfam13155), DUF4368 (pfam14287), FCS (LOAD_FCS)

Seq: QTYY01000006.1 Ruminococcus sp. TF08-4 TF08-4.Scaf6, whole genome shotgun sequence (193925 bp)
Overview 1 RT 1: 9581-13324 bp Neighborhood of RT #1 [9581, 13329] RVT-CRISPR cas1_HMARI Cas2_I_II_III Cas6 Feature: gene Location: 9581-11482 bp Ori: RGI19592.1 Gene: cas1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9791-10373 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 9791-10373 bp Feature: domain Description: cas1_HMARI Location: 10505-11474 bp Feature: domain Description: cas1_HMARI Location: 10505-11474 bp Feature: gene Location: 11510-11770 bp Ori: RGI19744.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 11519-11744 bp Feature: domain Description: Cas2 _I_II_III Location: 11519-11744 bp Feature: gene Location: 12607-13329 bp Ori: RGI19593.1 Gene: cas6 Feature: domain Description: Cas6 Location: 12610-13324 bp Feature: domain Description: Cas6 Location: 12 610-1332 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, cas1_HMARI (TIGR03641), Cas2_I_II_III (cl11442), Cas6 (pfam09559)