myRT

myRT report for GCA_003463495.1_ASM346349v1

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Seq: QSDC01000027.1 Bacteroides ovatus strain OF01-19AC OF01-19AC.Scaf27, whole genome shotgun sequence (85635 bp)
Overview 1 RT 1: 9787-20618 bp Neighborhood of RT #1 [9787, 20734] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 9787-10176 bp Feature: gene Location: 10195-11430 bp Feature: domain Description: Arm-DNA-bind_5 Location: 10231-10480 bp Feature: domain Description: Arm-DNA-bind_5 Location: 1 0231 -1 0480 bp Feature: domain Description: Phage_int_SAM_5 Location: 10519-10825 bp Feature: domain Description: Phage_int_SAM_5 Location: 1 051 9-1 0825 bp Feature: domain Description: INTN1_C_like Location: 10876-11356 bp Feature: domain Description: INTN1 _C_like Location: 1 0876-1 1 356 bp Feature: gene Location: 11746-12876 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12067-12610 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2067-1 261 0 bp Feature: gene Location: 12878-18835 bp Feature: domain Description: DUF4011 Location: 14108-14621 bp Feature: domain Description: DUF401 1 Location: 1 41 08-1 4621 bp Feature: domain Description: DEXXQc_SF1 Location: 14960-15926 bp Feature: domain Description: DEXXQc_SF1 Location: 1 4960-1 5926 bp Feature: domain Description: DEXXQc_SF1 Location: 16388-17147 bp Feature: domain Description: DEXXQc_SF1 Location: 1 6388-1 71 47 bp Feature: domain Description: TIGR00376 Location: 17279-17666 bp Feature: domain Description: TIGR00376 Location: 1 7279-1 7666 bp Feature: domain Description: MTES_1575 Location: 17819-18104 bp Feature: domain Description: MTES_1 575 Location: 1 781 9-1 81 04 bp Feature: domain Description: DUF3320 Location: 18344-18485 bp Feature: domain Description: DUF3320 Location: 1 8344-1 8485 bp Feature: gene Location: 18932-20734 bp Feature: domain Description: rpsA Location: 19001-20618 bp Feature: domain Description: rpsA Location: 1 9001 -2061 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-Retrons, DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), rpsA (TIGR00717)

Seq: QSDC01000004.1 Bacteroides ovatus strain OF01-19AC OF01-19AC.Scaf4, whole genome shotgun sequence (338647 bp)
Overview 1 RT 1: 35265-46650 bp Neighborhood of RT #1 [35265, 46650] Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-DGRs Laminin_G_3 CotH Feature: gene Location: 35265-36410 bp Feature: domain Description: Arm-DNA-bind_5 Location: 35289-35535 bp Feature: domain Description: Arm-DNA-bind_5 Location: 352 89-35535 bp Feature: domain Description: Phage_int_SAM_5 Location: 35574-35859 bp Feature: domain Description: Phage_int_SAM_5 Location: 35574-35859 bp Feature: domain Description: INTN1_C_like Location: 35898-36372 bp Feature: domain Description: INTN1_C_like Location: 35898-36372 bp Feature: gene Location: 36461-36955 bp Feature: gene Location: 36957-38252 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37173-37764 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37173-37764 bp Feature: gene Location: 38686-45474 bp Feature: domain Description: Laminin_G_3 Location: 41122-41503 bp Feature: domain Description: Laminin_G_3 Location: 4112 2 -41503 bp Feature: domain Description: CotH Location: 41767-42811 bp Feature: domain Description: CotH Location: 41767-42 811 bp Feature: gene Location: 45484-46650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-DGRs, Laminin_G_3 (pfam13385), CotH (pfam08757)