myRT

myRT report for GCA_003463895.1_ASM346389v1

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Seq: QSED01000026.1 Bacteroides stercoris strain AM50-6 AM50-6.Scaf26, whole genome shotgun sequence (20478 bp)
Overview 1 RT 1: 9717-16121 bp Neighborhood of RT #1 [9717, 16121] AAA_25 RVT-GII Intron_maturas2 Toprim_2 Feature: gene Location: 9717-10784 bp Ori: RGZ37043.1 Feature: domain Description: AAA_25 Location: 9852-10314 bp Feature: domain Description: AAA_25 Location: 9852-1 031 4 bp Feature: gene Location: 10996-11163 bp Feature: gene Location: 11727-13535 bp Ori: RGZ37044.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11991-12813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 991 -1 281 3 bp Feature: domain Description: Intron_maturas2 Location: 12882-13191 bp Feature: domain Description: Intron_maturas2 Location: 1 2882-1 31 91 bp Feature: gene Location: 13525-14436 bp Ori: RGZ37045.1 Feature: domain Description: Toprim_2 Location: 14059-14347 bp Feature: domain Description: Toprim_2 Location: 1 4059-1 4347 bp Feature: gene Location: 14718-16121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155)

Seq: QSED01000001.1 Bacteroides stercoris strain AM50-6 AM50-6.Scaf1, whole genome shotgun sequence (463850 bp)
Overview 1 RT 1: 9231-16295 bp Neighborhood of RT #1 [9231, 16295] COG3547 COG3547 ComA-like_MBL-fold ComA-like_MBL-fold RVT-UG9 DNA_pol_A DNA_pol_A Feature: gene Location: 9231-10370 bp Ori: RGZ41818.1 Feature: domain Description: COG3547 Location: 9246-9543 bp Feature: domain Description: COG3547 Location: 92 46-9543 bp Feature: domain Description: COG3547 Location: 9864-10314 bp Feature: domain Description: COG3547 Location: 9864-10314 bp Feature: gene Location: 10739-11731 bp Ori: RGZ41819.1 Feature: domain Description: ComA-like_MBL-fold Location: 10790-11054 bp Feature: domain Description: ComA-like_MBL-fold Location: 10790-11054 bp Feature: domain Description: ComA-like_MBL-fold Location: 11303-11471 bp Feature: domain Description: ComA-like_MBL-fold Location: 11303-11471 bp Feature: gene Location: 11706-14087 bp Ori: RGZ41820.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 12624-13239 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 12 62 4-132 39 bp Feature: gene Location: 14084-15523 bp Ori: RGZ41821.1 Feature: domain Description: DNA_pol_A Location: 14744-15137 bp Feature: domain Description: DNA_pol_A Location: 14744-15137 bp Feature: domain Description: DNA_pol_A Location: 15272-15419 bp Feature: domain Description: DNA_pol_A Location: 152 72 -15419 bp Feature: gene Location: 15930-16295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), ComA-like_MBL-fold (cd07731), RVT-UG9, DNA_pol_A (pfam00476)