myRT

myRT report for GCA_003464045.1_ASM346404v1

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Seq: QSDM01000002.1 Dorea sp. AM58-8 AM58-8.Scaf2, whole genome shotgun sequence (303447 bp)
Overview 1 RT 1: 195119-198981 bp Neighborhood of RT #1 [195119, 199040] Mtd_N RVT-DGRs Phage_XkdX SNARE_Qa SNARE_Qa Feature: gene Location: 195119-195505 bp Feature: domain Description: Mtd_N Location: 195143-195260 bp Feature: domain Description: Mtd_N Location: 1 951 43-1 95260 bp Feature: gene Location: 195505-196743 bp Feature: gene Location: 197201-198499 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 197462-198089 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 97462-1 98089 bp Feature: gene Location: 198652-198804 bp Feature: domain Description: Phage_XkdX Location: 198673-198784 bp Feature: domain Description: Phage_XkdX Location: 1 98673-1 98784 bp Feature: gene Location: 198801-199040 bp Feature: domain Description: SNARE_Qa Location: 198822-198891 bp Feature: domain Description: SNARE_Qa Location: 1 98822-1 98891 bp Feature: domain Description: SNARE_Qa Location: 198921-198981 bp Feature: domain Description: SNARE_Qa Location: 1 98921 -1 98981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mtd_N (pfam18454), RVT-DGRs, Phage_XkdX (pfam09693), SNARE_Qa (cd15840)

Seq: QSDM01000012.1 Dorea sp. AM58-8 AM58-8.Scaf12, whole genome shotgun sequence (113172 bp)
Overview 1 RT 1: 81205-86625 bp Neighborhood of RT #1 [81205, 86669] Maff2 TraG-D_C RVT-GII VirD4 VirD4 DUF3801 Feature: gene Location: 81205-81420 bp Feature: domain Description: Maff2 Location: 81208-81415 bp Feature: domain Description: Maff2 Location: 812 08-81415 bp Feature: gene Location: 81544-82575 bp Feature: domain Description: TraG-D_C Location: 82021-82375 bp Feature: domain Description: TraG-D_C Location: 82 02 1-82 375 bp Feature: gene Location: 82710-84617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83040-83784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83040-83784 bp Feature: gene Location: 85276-86181 bp Feature: domain Description: VirD4 Location: 85549-85894 bp Feature: domain Description: VirD4 Location: 85549-85894 bp Feature: domain Description: VirD4 Location: 85990-86143 bp Feature: domain Description: VirD4 Location: 85990-86143 bp Feature: gene Location: 86178-86669 bp Feature: domain Description: DUF3801 Location: 86244-86625 bp Feature: domain Description: DUF3801 Location: 862 44-8662 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), TraG-D_C (pfam12696), RVT-GII, VirD4 (COG3505), DUF3801 (pfam12687)

Seq: QSDM01000001.1 Dorea sp. AM58-8 AM58-8.Scaf1, whole genome shotgun sequence (311314 bp)
Overview 1 RT 1: 274822-279244 bp Neighborhood of RT #1 [274822, 279244] Maff2 RVT-GII HNHc Maff2 Feature: gene Location: 274822-275091 bp Feature: gene Location: 275368-275499 bp Feature: domain Description: Maff2 Location: 275371-275497 bp Feature: domain Description: Maff2 Location: 2753 71-275497 bp Feature: gene Location: 276218-278104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276551-277289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276551-277289 bp Feature: domain Description: HNHc Note: nucleases Location: 277838-277988 bp Feature: domain Description: HNHc Note: nucleases Location: 27783 8-277988 bp Feature: gene Location: 278254-278349 bp Feature: domain Description: Maff2 Location: 278257-278347 bp Feature: domain Description: Maff2 Location: 278257-2783 47 bp Feature: gene Location: 278372-279244 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Maff2 (pfam12750), RVT-GII, HNHc (smart00507)