myRT

myRT report for GCA_003464145.1_ASM346414v1

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Seq: QSEH01000053.1 Parabacteroides distasonis strain AM50-1 AM50-1.Scaf53, whole genome shotgun sequence (17409 bp)
Overview 1 RT 1: 10456-14664 bp Neighborhood of RT #1 [10456, 14672] DnaG RVT-GII Intron_maturas2 Toprim_2 MobC Feature: gene Location: 10456-10650 bp Feature: gene Location: 10713-10880 bp Feature: domain Description: DnaG Location: 10737-10866 bp Feature: domain Description: DnaG Location: 1 0737-1 0866 bp Feature: gene Location: 11443-13251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11707-12529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 707-1 2529 bp Feature: domain Description: Intron_maturas2 Location: 12598-12907 bp Feature: domain Description: Intron_maturas2 Location: 1 2598-1 2907 bp Feature: gene Location: 13241-14134 bp Feature: domain Description: Toprim_2 Location: 13775-14054 bp Feature: domain Description: Toprim_2 Location: 1 3775-1 4054 bp Feature: gene Location: 14310-14672 bp Feature: domain Description: MobC Location: 14538-14664 bp Feature: domain Description: MobC Location: 1 4538-1 4664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DnaG (COG0358), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), MobC (pfam05713)

Seq: QSEH01000044.1 Parabacteroides distasonis strain AM50-1 AM50-1.Scaf44, whole genome shotgun sequence (29141 bp)
Overview 1 RT 1: 19236-29015 bp Neighborhood of RT #1 [19236, 29044] DUF4133 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 DUF4141 RVT-GII matK HNHc Bac_Flav_CT_J Feature: gene Location: 19236-19568 bp Feature: domain Description: DUF4133 Location: 19254-19524 bp Feature: domain Description: DUF4133 Location: 192 54-1952 4 bp Feature: gene Location: 19565-20374 bp Feature: domain Description: Bac_Flav_CT_G Location: 19568-20375 bp Feature: domain Description: Bac_Flav_CT_G Location: 19568-2 0375 bp Feature: gene Location: 21001-22683 bp Feature: RT Description: RVT_N Location: 21064-21307 bp Feature: RT Description: RVT_N Location: 2 1064-2 1307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21352-22000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1352 -2 2 000 bp Feature: domain Description: GIIM Note: maturase Location: 22051-22285 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 051-2 2 2 85 bp Feature: gene Location: 22778-24472 bp Feature: domain Description: Bac_Flav_CT_G Location: 22781-24455 bp Feature: domain Description: Bac_Flav_CT_G Location: 2 2 781-2 4455 bp Feature: gene Location: 24510-24893 bp Feature: domain Description: DUF3876 Location: 24591-24855 bp Feature: domain Description: DUF3876 Location: 2 4591-2 4855 bp Feature: gene Location: 24924-25151 bp Feature: domain Description: DUF4141 Location: 24936-25092 bp Feature: domain Description: DUF4141 Location: 2 4936-2 5092 bp Feature: gene Location: 25702-27507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25966-26788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5966-2 6788 bp Feature: domain Description: matK Location: 26965-27178 bp Feature: domain Description: matK Location: 2 6965-2 7178 bp Feature: domain Description: HNHc Note: nucleases Location: 27340-27481 bp Feature: domain Description: HNHc Note: nucleases Location: 2 7340-2 7481 bp Feature: gene Location: 27500-28036 bp Feature: gene Location: 28040-29044 bp Feature: domain Description: Bac_Flav_CT_J Location: 28046-29015 bp Feature: domain Description: Bac_Flav_CT_J Location: 2 8046-2 9015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF3876 (pfam12992), DUF4141 (pfam13605), matK (CHL00002), HNHc (smart00507), Bac_Flav_CT_J (TIGR03782)

Seq: QSEH01000060.1 Parabacteroides distasonis strain AM50-1 AM50-1.Scaf60, whole genome shotgun sequence (11079 bp)
Overview 1 RT 1: 2567-10871 bp Neighborhood of RT #1 [2567, 10871] N6_Mtase N6_Mtase COG4646 RVT_N RVT-GII GIIM Feature: gene Location: 2567-7278 bp Feature: domain Description: N6_Mtase Location: 2879-2987 bp Feature: domain Description: N6_Mtase Location: 2879-2987 bp Feature: domain Description: N6_Mtase Location: 3128-3482 bp Feature: domain Description: N6_Mtase Location: 3 128-3 482 bp Feature: domain Description: COG4646 Location: 4826-5666 bp Feature: domain Description: COG4646 Location: 4826-5666 bp Feature: gene Location: 7767-7970 bp Feature: gene Location: 7936-9609 bp Feature: RT Description: RVT_N Location: 7990-8233 bp Feature: RT Description: RVT_N Location: 7990-823 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8278-8926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8278-8926 bp Feature: domain Description: GIIM Note: maturase Location: 8980-9211 bp Feature: domain Description: GIIM Note: maturase Location: 8980-9211 bp Feature: gene Location: 9606-10871 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)