myRT

myRT report for GCA_003464595.1_ASM346459v1

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Seq: QRZF01000019.1 Bacteroides intestinalis strain AF14-32 AF14-32.Scaf19, whole genome shotgun sequence (128671 bp)
Overview 1 RT 1: 111565-121223 bp Neighborhood of RT #1 [111565, 121225] YhcG COG4646 Helicase_C matK RVT-GII Intron_maturas2 N6_Mtase COG4646 Feature: gene Location: 111565-112578 bp Feature: domain Description: YhcG Location: 111898-112381 bp Feature: domain Description: YhcG Location: 1 1 1 898-1 1 2381 bp Feature: gene Location: 112642-115290 bp Feature: domain Description: COG4646 Location: 112645-113764 bp Feature: domain Description: COG4646 Location: 1 1 2645-1 1 3764 bp Feature: domain Description: Helicase_C Location: 113962-114181 bp Feature: domain Description: Helicase_C Location: 1 1 3962-1 1 41 81 bp Feature: gene Location: 115406-117208 bp Feature: domain Description: matK Location: 115475-115562 bp Feature: domain Description: matK Location: 1 1 5475-1 1 5562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115670-116492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 5670-1 1 6492 bp Feature: domain Description: Intron_maturas2 Location: 116642-116876 bp Feature: domain Description: Intron_maturas2 Location: 1 1 6642-1 1 6876 bp Feature: gene Location: 117215-117670 bp Feature: gene Location: 117773-121225 bp Feature: domain Description: N6_Mtase Location: 118064-118703 bp Feature: domain Description: N6_Mtase Location: 1 1 8064-1 1 8703 bp Feature: domain Description: COG4646 Location: 120290-121223 bp Feature: domain Description: COG4646 Location: 1 20290-1 21 223 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: QRZF01000023.1 Bacteroides intestinalis strain AF14-32 AF14-32.Scaf23, whole genome shotgun sequence (90988 bp)
Overview 1 RT 1: 27715-32263 bp Neighborhood of RT #1 [27715, 32271] COG1237 secD RVT-Retrons MFS_DtpA_like HptA Feature: gene Location: 27715-27819 bp Feature: domain Description: COG1237 Location: 27718-27814 bp Feature: domain Description: COG12 37 Location: 2 7718-2 7814 bp Feature: gene Location: 27917-28768 bp Feature: domain Description: secD Location: 28067-28322 bp Feature: domain Description: secD Location: 2 8067-2 832 2 bp Feature: gene Location: 28765-29886 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29077-29629 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 9077-2 962 9 bp Feature: gene Location: 30157-31695 bp Feature: domain Description: MFS_DtpA_like Location: 30178-31666 bp Feature: domain Description: MFS_DtpA_like Location: 30178-31666 bp Feature: gene Location: 31735-32271 bp Feature: domain Description: HptA Location: 31753-32263 bp Feature: domain Description: HptA Location: 31753-32 2 63 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: QRZF01000009.1 Bacteroides intestinalis strain AF14-32 AF14-32.Scaf9, whole genome shotgun sequence (223960 bp)
Overview 1 RT 1: 119145-122941 bp Neighborhood of RT #1 [119145, 122941] RVT-DGRs Feature: gene Location: 119145-119540 bp Feature: gene Location: 119556-119909 bp Feature: gene Location: 120290-121105 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 120623-120950 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 120623 -120950 bp Feature: gene Location: 121167-121367 bp Feature: gene Location: 121622-122941 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: QRZF01000001.1 Bacteroides intestinalis strain AF14-32 AF14-32.Scaf1, whole genome shotgun sequence (670390 bp)
Overview 1 RT 1: 649063-657395 bp Neighborhood of RT #1 [649063, 657400] DUF3876 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF4133 RVT-GII Intron_maturas2 HNHc DUF4134 Feature: gene Location: 649063-649377 bp Feature: domain Description: DUF3876 Location: 649117-649366 bp Feature: domain Description: DUF3876 Location: 64 9117-64 9366 bp Feature: gene Location: 649392-651098 bp Feature: domain Description: Bac_Flav_CT_G Location: 649524-651090 bp Feature: domain Description: Bac_Flav_CT_G Location: 64 9524 -651090 bp Feature: gene Location: 651083-652792 bp Feature: RT Description: RVT_N Location: 651185-651428 bp Feature: RT Description: RVT_N Location: 651185-6514 28 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 651473-652121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6514 73-652121 bp Feature: domain Description: GIIM Note: maturase Location: 652175-652406 bp Feature: domain Description: GIIM Note: maturase Location: 652175-6524 06 bp Feature: gene Location: 653346-654266 bp Feature: domain Description: Bac_Flav_CT_G Location: 653349-654267 bp Feature: domain Description: Bac_Flav_CT_G Location: 65334 9-654 267 bp Feature: gene Location: 654263-654586 bp Feature: domain Description: DUF4133 Location: 654317-654545 bp Feature: domain Description: DUF4 133 Location: 654 317-654 54 5 bp Feature: gene Location: 654646-656463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654910-655732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654 910-655732 bp Feature: domain Description: Intron_maturas2 Location: 655807-656134 bp Feature: domain Description: Intron_maturas2 Location: 655807-656134 bp Feature: domain Description: HNHc Note: nucleases Location: 656287-656437 bp Feature: domain Description: HNHc Note: nucleases Location: 656287-6564 37 bp Feature: gene Location: 657024-657086 bp Feature: gene Location: 657098-657400 bp Feature: domain Description: DUF4134 Location: 657128-657395 bp Feature: domain Description: DUF4 134 Location: 657128-657395 bp Sorry, your browser does not support inline SVG.
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