myRT

myRT report for GCA_003464965.1_ASM346496v1

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Seq: QSAF01000013.1 Bacteroides stercoris strain AF12-7 AF12-7.Scaf13, whole genome shotgun sequence (118679 bp)
Overview 1 RT 1: 4500-10905 bp Neighborhood of RT #1 [4500, 10905] AAA_25 RVT-GII Intron_maturas2 Toprim_2 Feature: gene Location: 4500-5567 bp Feature: domain Description: AAA_25 Location: 4635-5097 bp Feature: domain Description: AAA_25 Location: 4635-5097 bp Feature: gene Location: 5779-5946 bp Feature: gene Location: 6510-8318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6774-7596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6774-7596 bp Feature: domain Description: Intron_maturas2 Location: 7665-7974 bp Feature: domain Description: Intron_maturas2 Location: 7665-7974 bp Feature: gene Location: 8308-9219 bp Feature: domain Description: Toprim_2 Location: 8842-9130 bp Feature: domain Description: Toprim_2 Location: 8842-91 30 bp Feature: gene Location: 9502-10905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155)

Seq: QSAF01000019.1 Bacteroides stercoris strain AF12-7 AF12-7.Scaf19, whole genome shotgun sequence (67381 bp)
Overview 1 RT 1: 4540-10770 bp Neighborhood of RT #1 [4540, 10784] HTH_CRP RVT-Retrons Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like GGGtGRT Feature: gene Location: 4540-5184 bp Feature: domain Description: HTH_CRP Location: 4948-5062 bp Feature: domain Description: HTH_CRP Location: 4948-5062 bp Feature: gene Location: 7084-7299 bp Feature: gene Location: 7324-8172 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7483-8005 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7483-8005 bp Feature: gene Location: 8311-9408 bp Feature: domain Description: Arm-DNA-bind_5 Location: 8341-8596 bp Feature: domain Description: Arm-DNA-bind_5 Location: 8341-8596 bp Feature: domain Description: Phage_int_SAM_5 Location: 8644-8962 bp Feature: domain Description: Phage_int_SAM_5 Location: 8644-8962 bp Feature: domain Description: INTN1_C_like Location: 9001-9364 bp Feature: domain Description: INTN1_C_like Location: 9001-9364 bp Feature: gene Location: 9774-10784 bp Feature: domain Description: GGGtGRT Location: 9795-10770 bp Feature: domain Description: GGGtGRT Location: 9795-10770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_CRP (smart00419), RVT-Retrons, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), GGGtGRT (pfam14057)