myRT

myRT report for GCA_003465565.1_ASM346556v1

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Seq: QSAZ01000019.1 [Eubacterium] rectale strain AF06-19 AF06-19.Scaf19, whole genome shotgun sequence (66134 bp)
Overview 1 RT 1: 53909-58388 bp Neighborhood of RT #1 [53909, 58393] Avd_like RVT-DGRs Phage_holin_4_1 FlgJ CW_7 CW_7 CW_7 Feature: gene Location: 53909-54961 bp Feature: gene Location: 55025-55429 bp Ori: RGW85183.1 Feature: domain Description: Avd_like Location: 55085-55421 bp Feature: domain Description: Avd_like Location: 55085-55421 bp Feature: gene Location: 55740-56852 bp Ori: RGW85184.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55953-56610 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55953-5661 0 bp Feature: gene Location: 56889-57461 bp Ori: RGW85185.1 Feature: domain Description: Phage_holin_4_1 Location: 56976-57342 bp Feature: domain Description: Phage_holin_4_1 Location: 56976-57342 bp Feature: gene Location: 57464-58393 bp Ori: RGW85186.1 Feature: domain Description: FlgJ Location: 57470-57944 bp Feature: domain Description: FlgJ Location: 57470-57944 bp Feature: domain Description: CW_7 Location: 57962-58070 bp Feature: domain Description: CW_7 Location: 57962-58070 bp Feature: domain Description: CW_7 Location: 58124-58238 bp Feature: domain Description: CW_7 Location: 581 24-58238 bp Feature: domain Description: CW_7 Location: 58274-58388 bp Feature: domain Description: CW_7 Location: 58274-58388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Phage_holin_4_1 (pfam05105), FlgJ (COG1705), CW_7 (pfam08230)

Seq: QSAZ01000007.1 [Eubacterium] rectale strain AF06-19 AF06-19.Scaf7, whole genome shotgun sequence (154489 bp)
Overview 1 RT 1: 2534-11223 bp Neighborhood of RT #1 [2534, 11282] HipB INT_ICEBs1_C_like RVT-UG5 COG0610 RMtype1_S_TRD-CR_like redox_disulf_1 RMtype1_S_TRD-CR_like Feature: gene Location: 2534-3163 bp Ori: RGW86981.1 Feature: domain Description: HipB Location: 2564-2888 bp Feature: domain Description: HipB Location: 2 564-2 888 bp Feature: gene Location: 3250-4545 bp Ori: RGW86982.1 Feature: domain Description: INT_ICEBs1_C_like Location: 3844-4483 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3844-4483 bp Feature: gene Location: 4666-6648 bp Ori: RGW86983.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5173-5671 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5173-5671 bp Feature: gene Location: 6807-10133 bp Feature: domain Description: COG0610 Location: 6846-10026 bp Feature: domain Description: COG0610 Location: 6846-1002 6 bp Feature: gene Location: 10137-11282 bp Ori: RGW86984.1 Feature: domain Description: RMtype1_S_TRD-CR_like Location: 10230-10659 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 102 30-10659 bp Feature: domain Description: redox_disulf_1 Location: 10683-10809 bp Feature: domain Description: redox_disulf_1 Location: 10683-10809 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 10830-11223 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 10830-112 2 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HipB (COG1396), INT_ICEBs1_C_like (cd01189), RVT-UG5, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RMtype1_S_TRD-CR_like (cl38903), redox_disulf_1 (TIGR00411)

Seq: QSAZ01000010.1 [Eubacterium] rectale strain AF06-19 AF06-19.Scaf10, whole genome shotgun sequence (120195 bp)
Overview 1 RT 1: 64624-71569 bp Neighborhood of RT #1 [64624, 71589] FlgL RVT-UNC RVT-CRISPR cas1_HMARI Cas2 Feature: gene Location: 64624-66063 bp Ori: RGW86417.1 Feature: domain Description: FlgL Location: 64627-66061 bp Feature: domain Description: FlgL Location: 64627-66061 bp Feature: gene Location: 66256-66846 bp Feature: gene Location: 67711-67911 bp Ori: RGW86419.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 67717-67867 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 67717-67867 bp Feature: gene Location: 68246-68596 bp Feature: gene Location: 68727-69002 bp Feature: gene Location: 69071-69556 bp Feature: gene Location: 70354-71031 bp Ori: RGW86422.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 70567-71011 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 70567-71011 bp Feature: gene Location: 71079-71450 bp Ori: RGW86423.1 Feature: domain Description: cas1_HMARI Location: 71280-71442 bp Feature: domain Description: cas1_HMARI Location: 71280-71442 bp Feature: gene Location: 71416-71589 bp Ori: RGW86424.1 Feature: domain Description: Cas2 Location: 71437-71569 bp Feature: domain Description: Cas2 Location: 7143 7-71569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FlgL (COG1344), RVT-GII/RVT-CRISPR/RVT-UNC(RVT-UNC), RVT-CRISPR, cas1_HMARI (TIGR03641), Cas2 (COG3512)

Seq: QSAZ01000004.1 [Eubacterium] rectale strain AF06-19 AF06-19.Scaf4, whole genome shotgun sequence (296862 bp)
Overview 1 RT 1: 81459-84065 bp Neighborhood of RT #1 [81459, 84070] Phage_holin_Dp1 RVT-DGRs Phage_XkdX Feature: gene Location: 81459-81671 bp Ori: RGW88210.1 Feature: domain Description: Phage_holin_Dp1 Location: 81468-81654 bp Feature: domain Description: Phage_holin_Dp1 Location: 814 68-81654 bp Feature: gene Location: 81661-82005 bp Feature: gene Location: 82018-83223 bp Ori: RGW87996.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 82213-82930 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 82213-82930 bp Feature: gene Location: 83433-83930 bp Feature: gene Location: 83930-84070 bp Ori: RGW87998.1 Feature: domain Description: Phage_XkdX Location: 83951-84065 bp Feature: domain Description: Phage_XkdX Location: 83951-84 065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_Dp1 (pfam16938), RVT-DGRs, Phage_XkdX (pfam09693)