myRT

myRT report for GCA_003465765.1_ASM346576v1

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Seq: QSBO01000038.1 Bacteroides vulgatus strain AF04-12 AF04-12.Scaf38, whole genome shotgun sequence (51127 bp)
Overview 1 RT 1: 45547-51043 bp Neighborhood of RT #1 [45547, 51043] HTH_17 HTH_17 HTH_17 HTH_17 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-Retrons Feature: gene Location: 45547-46443 bp Feature: domain Description: HTH_17 Location: 45742-45877 bp Feature: domain Description: HTH_1 7 Location: 45742-45877 bp Feature: domain Description: HTH_17 Location: 45943-46090 bp Feature: domain Description: HTH_1 7 Location: 45943-46090 bp Feature: domain Description: HTH_17 Location: 46117-46246 bp Feature: domain Description: HTH_1 7 Location: 461 1 7-46246 bp Feature: domain Description: HTH_17 Location: 46285-46426 bp Feature: domain Description: HTH_1 7 Location: 46285-46426 bp Feature: gene Location: 46536-47642 bp Feature: domain Description: Arm-DNA-bind_5 Location: 46560-46767 bp Feature: domain Description: Arm-DNA-bind_5 Location: 46560-46767 bp Feature: domain Description: Phage_int_SAM_5 Location: 46824-47091 bp Feature: domain Description: Phage_int_SAM_5 Location: 46824-47091 bp Feature: domain Description: INTN1_C_like Location: 47151-47610 bp Feature: domain Description: INTN1 _C_like Location: 471 51 -4761 0 bp Feature: gene Location: 47751-48800 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47979-48558 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47979-48558 bp Feature: gene Location: 48935-50233 bp Feature: gene Location: 50516-51043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-Retrons

Seq: QSBO01000112.1 Bacteroides vulgatus strain AF04-12 AF04-12.Scaf112, whole genome shotgun sequence (1637 bp)
Overview 1 RT 1: 18-825 bp Neighborhood of RT #1 [18, 1319] RVT-DGRs Feature: gene Location: 18-1319 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 231-825 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 31-82 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs