myRT

myRT report for GCA_003466265.1_ASM346626v1

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Seq: QSOK01000005.1 Dorea formicigenerans strain TM09-16AC TM09-16AC.Scaf5, whole genome shotgun sequence (172129 bp)
Overview 1 RT 1: 131585-137066 bp Neighborhood of RT #1 [131585, 137071] DUF3801 T4SS-DNA_transf RVT-GII VirD4 Maff2 Feature: gene Location: 131585-132112 bp Feature: domain Description: DUF3801 Location: 131684-132092 bp Feature: domain Description: DUF3801 Location: 1 31 684-1 32092 bp Feature: gene Location: 132109-132705 bp Feature: domain Description: T4SS-DNA_transf Location: 132559-132703 bp Feature: domain Description: T4SS-DNA_transf Location: 1 32559-1 32703 bp Feature: gene Location: 133462-135309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133762-134479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 33762-1 34479 bp Feature: gene Location: 135461-136720 bp Feature: domain Description: VirD4 Location: 135464-136550 bp Feature: domain Description: VirD4 Location: 1 35464-1 36550 bp Feature: gene Location: 136856-137071 bp Feature: domain Description: Maff2 Location: 136859-137066 bp Feature: domain Description: Maff2 Location: 1 36859-1 37066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3801 (pfam12687), T4SS-DNA_transf (pfam02534), RVT-GII, VirD4 (COG3505), Maff2 (pfam12750)

Seq: QSOK01000014.1 Dorea formicigenerans strain TM09-16AC TM09-16AC.Scaf14, whole genome shotgun sequence (90521 bp)
Overview 1 RT 1: 37137-48535 bp Neighborhood of RT #1 [37137, 48535] dnaG DUF3991 Toprim_2 COG4646 Helicase_C RVT-GII HNHc YtxK COG4646 Feature: gene Location: 37137-38099 bp Feature: domain Description: dnaG Location: 37269-37446 bp Feature: domain Description: dnaG Location: 372 69-37446 bp Feature: domain Description: DUF3991 Location: 37500-37707 bp Feature: domain Description: DUF3991 Location: 37500-37707 bp Feature: domain Description: Toprim_2 Location: 37731-38043 bp Feature: domain Description: Toprim_2 Location: 37731-38043 bp Feature: gene Location: 38120-40498 bp Feature: domain Description: COG4646 Location: 38123-39185 bp Feature: domain Description: COG4646 Location: 3812 3-39185 bp Feature: domain Description: Helicase_C Location: 39239-39596 bp Feature: domain Description: Helicase_C Location: 392 39-39596 bp Feature: gene Location: 40669-42552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40987-41716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40987-41716 bp Feature: domain Description: HNHc Note: nucleases Location: 42268-42436 bp Feature: domain Description: HNHc Note: nucleases Location: 42 2 68-42 436 bp Feature: gene Location: 43303-48234 bp Feature: domain Description: YtxK Location: 45937-46693 bp Feature: domain Description: YtxK Location: 45937-46693 bp Feature: domain Description: COG4646 Location: 46735-48235 bp Feature: domain Description: COG4646 Location: 46735-482 35 bp Feature: gene Location: 48260-48535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), DUF3991 (pfam13154), Toprim_2 (pfam13155), COG4646 (Adenine-specific DNA methylase, N12 class ), Helicase_C (pfam00271), RVT-GII, HNHc (smart00507), YtxK (COG0827)

Seq: QSOK01000031.1 Dorea formicigenerans strain TM09-16AC TM09-16AC.Scaf31, whole genome shotgun sequence (22363 bp)
Overview 1 RT 1: 19508-22109 bp Neighborhood of RT #1 [19508, 22291] DUF3841 RVT-GII GIIM Feature: gene Location: 19508-20077 bp Feature: domain Description: DUF3841 Location: 19517-20048 bp Feature: domain Description: DUF3 841 Location: 19517-20048 bp Feature: gene Location: 20212-20361 bp Feature: gene Location: 20897-22291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21215-21839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21215-2183 9 bp Feature: domain Description: GIIM Note: maturase Location: 21896-22109 bp Feature: domain Description: GIIM Note: maturase Location: 21896-22109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3841 (pfam12952), RVT-GII, GIIM (pfam08388)