myRT

myRT report for GCA_003466885.1_ASM346688v1

Download annotations/find similar RTs

Seq: QSFH01000031.1 Bacteroides uniformis strain AM43-9 AM43-9.Scaf31, whole genome shotgun sequence (34617 bp)
Overview 1 RT 1: 4118-9521 bp Neighborhood of RT #1 [4118, 9598] YWFCY RVT_N RVT-GII GIIM TraG-D_C AbiEii Feature: gene Location: 4118-4834 bp Feature: domain Description: YWFCY Location: 4124-4301 bp Feature: domain Description: YWFCY Location: 41 24-4301 bp Feature: gene Location: 5170-5362 bp Feature: gene Location: 5465-7129 bp Feature: RT Description: RVT_N Location: 5519-5759 bp Feature: RT Description: RVT_N Location: 551 9-5759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5807-6461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5807-6461 bp Feature: domain Description: GIIM Note: maturase Location: 6515-6746 bp Feature: domain Description: GIIM Note: maturase Location: 651 5-6746 bp Feature: gene Location: 7246-8538 bp Feature: domain Description: TraG-D_C Location: 7912-8245 bp Feature: domain Description: TraG-D_C Location: 791 2-8245 bp Feature: gene Location: 8582-9598 bp Feature: domain Description: AbiEii Location: 8693-9521 bp Feature: domain Description: AbiEii Location: 8693-9521 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), AbiEii (pfam08843)

Seq: QSFH01000003.1 Bacteroides uniformis strain AM43-9 AM43-9.Scaf3, whole genome shotgun sequence (344428 bp)
Overview 1 RT 1: 14418-19646 bp Neighborhood of RT #1 [14418, 19646] YWFCY T4SS-DNA_transf RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 14418-15407 bp Feature: domain Description: YWFCY Location: 14424-14601 bp Feature: domain Description: YWFCY Location: 1442 4-14601 bp Feature: domain Description: T4SS-DNA_transf Location: 14892-15390 bp Feature: domain Description: T4SS-DNA_transf Location: 14892 -15390 bp Feature: gene Location: 15466-15939 bp Feature: gene Location: 15973-17778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16237-17059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 37-17059 bp Feature: domain Description: Intron_maturas2 Location: 17137-17467 bp Feature: domain Description: Intron_maturas2 Location: 17137-17467 bp Feature: domain Description: HNHc Note: nucleases Location: 17611-17755 bp Feature: domain Description: HNHc Note: nucleases Location: 17611-17755 bp Feature: gene Location: 17765-18943 bp Feature: domain Description: TraG-D_C Location: 18290-18623 bp Feature: domain Description: TraG-D_C Location: 182 90-1862 3 bp Feature: gene Location: 19233-19646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YWFCY (pfam14293), T4SS-DNA_transf (pfam02534), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696)