myRT

myRT report for GCA_003466965.1_ASM346696v1

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Seq: QSFL01000019.1 Blautia obeum strain AM43-41 AM43-41.Scaf19, whole genome shotgun sequence (42231 bp)
Overview 1 RT 1: 1-9518 bp Neighborhood of RT #1 [1, 10027] COG4646 HepA RVT_N RVT-GII GIIM ArdC YodL DUF3849 LPD18 LPD16 LPD16 Feature: gene Location: 1-2058 bp Feature: domain Description: COG4646 Location: 43-1561 bp Feature: domain Description: COG4646 Location: 43-1 561 bp Feature: domain Description: HepA Location: 1903-2035 bp Feature: domain Description: HepA Location: 1 903-2035 bp Feature: gene Location: 2637-4307 bp Feature: RT Description: RVT_N Location: 2682-2925 bp Feature: RT Description: RVT_N Location: 2682-2925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2970-3618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2970-361 8 bp Feature: domain Description: GIIM Note: maturase Location: 3672-3903 bp Feature: domain Description: GIIM Note: maturase Location: 3672-3903 bp Feature: gene Location: 4392-5366 bp Feature: gene Location: 5420-10027 bp Feature: domain Description: ArdC Location: 5627-6218 bp Feature: domain Description: ArdC Location: 5627-621 8 bp Feature: domain Description: YodL Location: 7445-7736 bp Feature: domain Description: YodL Location: 7445-7736 bp Feature: domain Description: DUF3849 Location: 7793-8168 bp Feature: domain Description: DUF3849 Location: 7793-81 68 bp Feature: domain Description: LPD18 Location: 8207-8453 bp Feature: domain Description: LPD1 8 Location: 8207-8453 bp Feature: domain Description: LPD16 Location: 8963-9191 bp Feature: domain Description: LPD1 6 Location: 8963-91 91 bp Feature: domain Description: LPD16 Location: 9317-9518 bp Feature: domain Description: LPD1 6 Location: 931 7-951 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4646 (Adenine-specific DNA methylase, N12 class ), HepA (COG0553), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), ArdC (COG4227), YodL (pfam14191), DUF3849 (pfam12960), LPD18 (pfam18832), LPD16 (pfam18830)

Seq: QSFL01000006.1 Blautia obeum strain AM43-41 AM43-41.Scaf6, whole genome shotgun sequence (219794 bp)
Overview 1 RT 1: 81081-85680 bp Neighborhood of RT #1 [81081, 85853] DUF4314 VirD4 RVT-GII T4SS-DNA_transf Feature: gene Location: 81081-81359 bp Feature: domain Description: DUF4314 Location: 81099-81291 bp Feature: domain Description: DUF4314 Location: 81099-812 91 bp Feature: gene Location: 81392-82057 bp Feature: domain Description: VirD4 Location: 81614-82058 bp Feature: domain Description: VirD4 Location: 81614-82 058 bp Feature: gene Location: 82753-84660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83083-83827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83083-8382 7 bp Feature: gene Location: 84662-84841 bp Feature: gene Location: 84822-85853 bp Feature: domain Description: T4SS-DNA_transf Location: 84849-85680 bp Feature: domain Description: T4SS-DNA_transf Location: 84849-85680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4314 (pfam14192), VirD4 (COG3505), RVT-GII, T4SS-DNA_transf (pfam02534)