myRT

myRT report for GCA_003467085.1_ASM346708v1

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Seq: QSES01000002.1 [Eubacterium] rectale strain AM47-6BH AM47-6BH.Scaf2, whole genome shotgun sequence (172977 bp)
Overview 1 RT 1: 163326-166874 bp Neighborhood of RT #1 [163326, 166909] RVT-GII MhpC DUF3267 Feature: gene Location: 163326-163706 bp Feature: gene Location: 163941-164120 bp Feature: gene Location: 164210-165505 bp Ori: RGZ95544.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164465-165155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 64465-1 651 55 bp Feature: gene Location: 165641-166381 bp Ori: RGZ95545.1 Feature: domain Description: MhpC Location: 165650-165992 bp Feature: domain Description: MhpC Location: 1 65650-1 65992 bp Feature: gene Location: 166601-166909 bp Ori: RGZ95546.1 Feature: domain Description: DUF3267 Location: 166712-166874 bp Feature: domain Description: DUF3267 Location: 1 6671 2-1 66874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, MhpC (COG0596), DUF3267 (pfam11667)

Seq: QSES01000018.1 [Eubacterium] rectale strain AM47-6BH AM47-6BH.Scaf18, whole genome shotgun sequence (75097 bp)
Overview 1 RT 1: 1814-7247 bp Neighborhood of RT #1 [1814, 7247] T4SS-DNA_transf Cas2_I_II_III RVT-CRISPR cas1_HMARI TrwB_AAD_bind Feature: gene Location: 1814-3082 bp Ori: RGZ91326.1 Feature: domain Description: T4SS-DNA_transf Location: 1889-2909 bp Feature: domain Description: T4SS-DNA_transf Location: 1889-2 909 bp Feature: gene Location: 3282-3542 bp Ori: RGZ91327.1 Gene: cas2 Feature: domain Description: Cas2_I_II_III Location: 3291-3519 bp Feature: domain Description: Cas2 _I_II_III Location: 32 91-3519 bp Feature: gene Location: 3561-5285 bp Ori: RGZ91328.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3756-4329 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3756-432 9 bp Feature: domain Description: cas1_HMARI Location: 4470-4845 bp Feature: domain Description: cas1_HMARI Location: 4470-4845 bp Feature: gene Location: 5282-5989 bp Ori: RGZ91329.1 Feature: domain Description: TrwB_AAD_bind Location: 5414-5885 bp Feature: domain Description: TrwB_AAD_bind Location: 5414-5885 bp Feature: gene Location: 6006-7247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), Cas2_I_II_III (cl11442), RVT-CRISPR, cas1_HMARI (TIGR03641), TrwB_AAD_bind (pfam10412)

Seq: QSES01000094.1 [Eubacterium] rectale strain AM47-6BH AM47-6BH.Scaf94, whole genome shotgun sequence (1910 bp)
Overview 1 RT 1: 73-1817 bp Neighborhood of RT #1 [73, 1817] RVT-GII GIIM Feature: gene Location: 73-1467 bp Ori: RGZ85294.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391-1015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 91-1015 bp Feature: domain Description: GIIM Note: maturase Location: 1072-1294 bp Feature: domain Description: GIIM Note: maturase Location: 1072-1294 bp Feature: gene Location: 1575-1817 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)