myRT

myRT report for GCA_003467095.1_ASM346709v1

Download annotations/find similar RTs

Seq: QSEX01000041.1 Bacteroides vulgatus strain AM46-1 AM46-1.Scaf41, whole genome shotgun sequence (43123 bp)
Overview 1 RT 1: 40739-42925 bp Neighborhood of RT #1 [40739, 43014] DUF3873 RVT-GII Feature: gene Location: 40739-41026 bp Feature: gene Location: 41039-41260 bp Feature: domain Description: DUF3873 Location: 41048-41249 bp Feature: domain Description: DUF3873 Location: 41 048-41 249 bp Feature: gene Location: 41839-43014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42103-42925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 421 03-42925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3873 (pfam12989), RVT-GII

Seq: QSEX01000015.1 Bacteroides vulgatus strain AM46-1 AM46-1.Scaf15, whole genome shotgun sequence (98245 bp)
Overview 1 RT 1: 130-4379 bp Neighborhood of RT #1 [130, 4849] Toprim_2 RVT-GII Intron_maturas2 AAA_25 Feature: gene Location: 130-1041 bp Feature: domain Description: Toprim_2 Location: 664-952 bp Feature: domain Description: Toprim_2 Location: 664-952 bp Feature: gene Location: 1031-2839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1295-2117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 95-2 117 bp Feature: domain Description: Intron_maturas2 Location: 2186-2495 bp Feature: domain Description: Intron_maturas2 Location: 2 186-2 495 bp Feature: gene Location: 3403-3570 bp Feature: gene Location: 3782-4849 bp Feature: domain Description: AAA_25 Location: 3917-4379 bp Feature: domain Description: AAA_2 5 Location: 3917-4379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), AAA_25 (pfam13481)

Seq: QSEX01000003.1 Bacteroides vulgatus strain AM46-1 AM46-1.Scaf3, whole genome shotgun sequence (152194 bp)
Overview 1 RT 1: 74983-83126 bp 2 RT 2: 108921-113638 bp Neighborhood of RT #1 [74983, 83126] N6_Mtase COG4646 RVT_N RVT-GII GIIM Neighborhood of RT #2 [108921, 114090] Toprim_2 RVT-GII AAA_25 Feature: gene Location: 74983-75243 bp Feature: gene Location: 75335-79372 bp Feature: domain Description: N6_Mtase Location: 75863-76289 bp Feature: domain Description: N6_Mtase Location: 75863 -76289 bp Feature: domain Description: COG4646 Location: 76787-78755 bp Feature: domain Description: COG4646 Location: 76787-78755 bp Feature: gene Location: 80031-81698 bp Feature: RT Description: RVT_N Location: 80085-80328 bp Feature: RT Description: RVT_N Location: 80085-803 28 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80373-81021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 803 73 -81021 bp Feature: domain Description: GIIM Note: maturase Location: 81075-81306 bp Feature: domain Description: GIIM Note: maturase Location: 81075-813 06 bp Feature: gene Location: 81682-82785 bp Feature: gene Location: 82923-83126 bp Feature: gene Location: 108921-109370 bp Feature: gene Location: 109598-110425 bp Feature: domain Description: Toprim_2 Location: 110117-110399 bp Feature: domain Description: Toprim_2 Location: 110117-1103 99 bp Feature: gene Location: 110439-112246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110703-111165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 110703 -111165 bp Feature: gene Location: 112792-112974 bp Feature: gene Location: 113035-114090 bp Feature: domain Description: AAA_25 Location: 113173-113638 bp Feature: domain Description: AAA_25 Location: 113 173 -113 63 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Toprim_2 (pfam13155), AAA_25 (pfam13481)