myRT

myRT report for GCA_003468045.1_ASM346804v1

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Seq: QSGE01000033.1 Coprobacillus sp. AM42-12AC AM42-12AC.Scaf33, whole genome shotgun sequence (24207 bp)
Overview 1 RT 1: 8002-12500 bp Neighborhood of RT #1 [8002, 13345] ManC HxlR RVT-GII RVT-GII GIIM DUF871 GT_WecA_like Feature: gene Location: 8002-8355 bp Feature: domain Description: ManC Location: 8128-8320 bp Feature: domain Description: ManC Location: 81 28-8320 bp Feature: gene Location: 8494-8826 bp Feature: domain Description: HxlR Location: 8512-8821 bp Feature: domain Description: HxlR Location: 851 2-8821 bp Feature: gene Location: 8885-9541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9200-9536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9200-9536 bp Feature: gene Location: 9562-10290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9571-9817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9571 -981 7 bp Feature: domain Description: GIIM Note: maturase Location: 9877-10081 bp Feature: domain Description: GIIM Note: maturase Location: 9877-1 0081 bp Feature: gene Location: 10382-11602 bp Feature: domain Description: DUF871 Location: 10466-11594 bp Feature: domain Description: DUF871 Location: 1 0466-1 1 594 bp Feature: gene Location: 11666-13345 bp Feature: domain Description: GT_WecA_like Location: 11783-12500 bp Feature: domain Description: GT_WecA_like Location: 1 1 783-1 2500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF871 (pfam05913), ManC (COG0662), HxlR (pfam01638), RVT-GII, GIIM (pfam08388), GT_WecA_like (cd06853)

Seq: QSGE01000006.1 Coprobacillus sp. AM42-12AC AM42-12AC.Scaf6, whole genome shotgun sequence (113908 bp)
Overview 1 RT 1: 52196-57082 bp Neighborhood of RT #1 [52196, 57082] DUF1863 RVT-Retrons Feature: gene Location: 52196-52855 bp Feature: gene Location: 52858-53283 bp Feature: domain Description: DUF1863 Location: 52873-53206 bp Feature: domain Description: DUF1863 Location: 52 873-532 06 bp Feature: gene Location: 53332-55344 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 54424-55027 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5442 4-5502 7 bp Feature: gene Location: 56287-56568 bp Feature: gene Location: 56819-57082 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1863 (pfam08937), RVT-Retrons