myRT

myRT report for GCA_003468405.1_ASM346840v1

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Seq: QSHU01000001.1 [Eubacterium] rectale strain AM36-3AA AM36-3AA.Scaf1, whole genome shotgun sequence (356227 bp)
Overview 1 RT 1: 127141-130531 bp Neighborhood of RT #1 [127141, 130638] FGE-sulfatase Avd_like RVT-DGRs DUF16 Feature: gene Location: 127141-128226 bp Feature: domain Description: FGE-sulfatase Location: 127348-127708 bp Feature: domain Description: FGE-sulfatase Location: 1 27348-1 27708 bp Feature: gene Location: 128370-128705 bp Feature: domain Description: Avd_like Location: 128388-128694 bp Feature: domain Description: Avd_like Location: 1 28388-1 28694 bp Feature: gene Location: 128927-130069 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 129194-129851 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 291 94-1 29851 bp Feature: gene Location: 130071-130289 bp Feature: gene Location: 130330-130638 bp Feature: domain Description: DUF16 Location: 130345-130531 bp Feature: domain Description: DUF1 6 Location: 1 30345-1 30531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs, DUF16 (pfam01519)

Seq: QSHU01000010.1 [Eubacterium] rectale strain AM36-3AA AM36-3AA.Scaf10, whole genome shotgun sequence (112498 bp)
Overview 1 RT 1: 19103-24338 bp Neighborhood of RT #1 [19103, 24343] mycofact_OYE_2 RVT-GII GIIM PRK12548 Feature: gene Location: 19103-19243 bp Feature: gene Location: 19350-21350 bp Feature: domain Description: mycofact_OYE_2 Location: 19371-21318 bp Feature: domain Description: mycofact_OYE_2 Location: 19371-2 1318 bp Feature: gene Location: 21490-22884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21808-22432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1808-2 2 432 bp Feature: domain Description: GIIM Note: maturase Location: 22489-22711 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 489-2 2 711 bp Feature: gene Location: 23236-23385 bp Feature: gene Location: 23450-24343 bp Feature: domain Description: PRK12548 Location: 23477-24338 bp Feature: domain Description: PRK12 548 Location: 2 3477-2 4338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mycofact_OYE_2 (TIGR03997), RVT-GII, GIIM (pfam08388), PRK12548 (shikimate dehydrogenase)

Seq: QSHU01000002.1 [Eubacterium] rectale strain AM36-3AA AM36-3AA.Scaf2, whole genome shotgun sequence (255987 bp)
Overview 1 RT 1: 35922-40401 bp Neighborhood of RT #1 [35922, 40406] Avd_like RVT-DGRs Phage_holin_4_1 FlgJ CW_7 CW_7 CW_7 Feature: gene Location: 35922-36974 bp Feature: gene Location: 37038-37442 bp Feature: domain Description: Avd_like Location: 37098-37434 bp Feature: domain Description: Avd_like Location: 3 7098-3 743 4 bp Feature: gene Location: 37753-38865 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37966-38623 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 7966-3 8623 bp Feature: gene Location: 38902-39474 bp Feature: domain Description: Phage_holin_4_1 Location: 38989-39355 bp Feature: domain Description: Phage_holin_4_1 Location: 3 8989-3 93 55 bp Feature: gene Location: 39477-40406 bp Feature: domain Description: FlgJ Location: 39483-39960 bp Feature: domain Description: FlgJ Location: 3 9483 -3 9960 bp Feature: domain Description: CW_7 Location: 39975-40083 bp Feature: domain Description: CW_7 Location: 3 9975-40083 bp Feature: domain Description: CW_7 Location: 40137-40251 bp Feature: domain Description: CW_7 Location: 4013 7-40251 bp Feature: domain Description: CW_7 Location: 40287-40401 bp Feature: domain Description: CW_7 Location: 40287-40401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Phage_holin_4_1 (pfam05105), FlgJ (COG1705), CW_7 (pfam08230)

Seq: QSHU01000022.1 [Eubacterium] rectale strain AM36-3AA AM36-3AA.Scaf22, whole genome shotgun sequence (48613 bp)
Overview 1 RT 1: 16746-21477 bp Neighborhood of RT #1 [16746, 21821] SR_TndX_transposase Recombinase RVT-GII GIIM AbiEi_3_N Feature: gene Location: 16746-18326 bp Feature: domain Description: SR_TndX_transposase Location: 16770-17220 bp Feature: domain Description: SR_TndX_transposase Location: 16770-17220 bp Feature: domain Description: Recombinase Location: 17322-17688 bp Feature: domain Description: Recombinase Location: 17322-17688 bp Feature: gene Location: 18358-18531 bp Feature: gene Location: 18888-20129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19089-19707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19089-19707 bp Feature: domain Description: GIIM Note: maturase Location: 19761-19977 bp Feature: domain Description: GIIM Note: maturase Location: 19761-19977 bp Feature: gene Location: 20386-20892 bp Feature: gene Location: 21228-21821 bp Feature: domain Description: AbiEi_3_N Location: 21300-21477 bp Feature: domain Description: AbiEi_3_N Location: 21300-214 77 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_TndX_transposase (cd03770), Recombinase (pfam07508), RVT-GII, GIIM (pfam08388), AbiEi_3_N (pfam17194)

Seq: QSHU01000003.1 [Eubacterium] rectale strain AM36-3AA AM36-3AA.Scaf3, whole genome shotgun sequence (232785 bp)
Overview 1 RT 1: 20545-24612 bp Neighborhood of RT #1 [20545, 24612] RVT-DGRs Feature: gene Location: 20545-20835 bp Feature: gene Location: 20951-21310 bp Feature: gene Location: 21276-22532 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21567-22158 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 215 67-2215 8 bp Feature: gene Location: 22663-22836 bp Feature: gene Location: 22918-24612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs