myRT

myRT report for GCA_003468525.1_ASM346852v1

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Seq: QSIG01000004.1 Prevotella sp. AM34-19LB AM34-19LB.Scaf4, whole genome shotgun sequence (138374 bp)
Overview 1 RT 1: 114-1907 bp 2 RT 2: 132697-138339 bp Neighborhood of RT #1 [114, 1907] RVT-GII GIIM Neighborhood of RT #2 [132697, 138339] COG1373 RVT-GII GIIM Feature: gene Location: 114-1376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 318-975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 8-975 bp Feature: domain Description: GIIM Note: maturase Location: 1056-1281 bp Feature: domain Description: GIIM Note: maturase Location: 1 056-1 281 bp Feature: gene Location: 1492-1695 bp Feature: gene Location: 1689-1907 bp Feature: gene Location: 132697-133935 bp Feature: domain Description: COG1373 Location: 132727-133927 bp Feature: domain Description: COG1 373 Location: 1 32727-1 33927 bp Feature: gene Location: 134099-136393 bp Feature: gene Location: 136546-137808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136750-137407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 36750-1 37407 bp Feature: domain Description: GIIM Note: maturase Location: 137488-137713 bp Feature: domain Description: GIIM Note: maturase Location: 1 37488-1 3771 3 bp Feature: gene Location: 137924-138127 bp Feature: gene Location: 138121-138339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG1373 (Predicted ATPase, AAA+ superfamily )

Seq: QSIG01000076.1 Prevotella sp. AM34-19LB AM34-19LB.Scaf76, whole genome shotgun sequence (9137 bp)
Overview 1 RT 1: 1957-4493 bp Neighborhood of RT #1 [1957, 4552] DUF5106 Thioredoxin_8 RVT-DGRs Avd_like Feature: gene Location: 1957-2127 bp Feature: gene Location: 2285-3139 bp Feature: domain Description: DUF5106 Location: 2381-2717 bp Feature: domain Description: DUF5106 Location: 2 381-2 717 bp Feature: domain Description: Thioredoxin_8 Location: 2801-3077 bp Feature: domain Description: Thioredoxin_8 Location: 2 801-3077 bp Feature: gene Location: 3224-3691 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3434-3647 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3434-3647 bp Feature: gene Location: 3690-3920 bp Feature: gene Location: 4157-4552 bp Feature: domain Description: Avd_like Location: 4184-4493 bp Feature: domain Description: Avd_like Location: 4184-4493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5106 (pfam17127), Thioredoxin_8 (pfam13905), RVT-DGRs, Avd_like (cd16376)

Seq: QSIG01000008.1 Prevotella sp. AM34-19LB AM34-19LB.Scaf8, whole genome shotgun sequence (93635 bp)
Overview 1 RT 1: 57549-61936 bp Neighborhood of RT #1 [57549, 61936] RVT-DGRs RVT-DGRs Feature: gene Location: 57549-59021 bp Feature: gene Location: 59267-59434 bp Feature: gene Location: 59619-61220 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 59826-60339 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 59826-603 3 9 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 60363-60567 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 603 63 -60567 bp Feature: gene Location: 61224-61613 bp Feature: gene Location: 61700-61936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs