myRT

myRT report for GCA_003468965.1_ASM346896v1

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Seq: QSJS01000024.1 [Eubacterium] rectale strain AM30-13AC AM30-13AC.Scaf24, whole genome shotgun sequence (42373 bp)
Overview 1 RT 1: 17-4954 bp Neighborhood of RT #1 [17, 5052] COG3666 DDE_Tnp_1_6 RVT-GII GIIM CysE Feature: gene Location: 17-334 bp Feature: gene Location: 481-1896 bp Feature: domain Description: COG3666 Location: 523-943 bp Feature: domain Description: COG3666 Location: 523-943 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1492-1843 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 492-1 843 bp Feature: gene Location: 2051-3445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2369-2993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2369-2993 bp Feature: domain Description: GIIM Note: maturase Location: 3050-3272 bp Feature: domain Description: GIIM Note: maturase Location: 3050-3272 bp Feature: gene Location: 3797-4093 bp Feature: gene Location: 4096-5052 bp Feature: domain Description: CysE Location: 4462-4954 bp Feature: domain Description: CysE Location: 4462-4954 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), CysE (COG1045), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751)

Seq: QSJS01000025.1 [Eubacterium] rectale strain AM30-13AC AM30-13AC.Scaf25, whole genome shotgun sequence (40651 bp)
Overview 1 RT 1: 26907-30434 bp Neighborhood of RT #1 [26907, 30523] PHA00653 Avd_like RVT-DGRs Phage_holin_4_1 Feature: gene Location: 26907-28049 bp Feature: domain Description: PHA00653 Location: 27030-28047 bp Feature: domain Description: PHA00653 Location: 2 7030-2 8047 bp Feature: gene Location: 28090-28446 bp Feature: domain Description: Avd_like Location: 28120-28426 bp Feature: domain Description: Avd_like Location: 2 812 0-2 842 6 bp Feature: gene Location: 28773-29834 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29010-29631 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 9010-2 9631 bp Feature: gene Location: 29859-30038 bp Feature: gene Location: 30035-30523 bp Feature: domain Description: Phage_holin_4_1 Location: 30074-30434 bp Feature: domain Description: Phage_holin_4_1 Location: 30074-30434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: QSJS01000006.1 [Eubacterium] rectale strain AM30-13AC AM30-13AC.Scaf6, whole genome shotgun sequence (173104 bp)
Overview 1 RT 1: 4563-12475 bp Neighborhood of RT #1 [4563, 12579] CBD_II CBD_II VWA Binary_toxB DEDD_Tnp_IS110 Transposase_20 RVT-GII Acetyltransf_7 Feature: gene Location: 4563-8147 bp Feature: domain Description: CBD_II Location: 4863-5127 bp Feature: domain Description: CBD_II Location: 4863 -5127 bp Feature: domain Description: CBD_II Location: 5181-5415 bp Feature: domain Description: CBD_II Location: 5181-5415 bp Feature: domain Description: VWA Location: 6273-6762 bp Feature: domain Description: VWA Location: 6273 -6762 bp Feature: domain Description: Binary_toxB Location: 6909-7080 bp Feature: domain Description: Binary_toxB Location: 6909-7080 bp Feature: gene Location: 8485-9750 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 8587-9064 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 8587-9064 bp Feature: domain Description: Transposase_20 Location: 9382-9628 bp Feature: domain Description: Transposase_20 Location: 93 82-9628 bp Feature: gene Location: 10349-11644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10604-11294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10604-11294 bp Feature: gene Location: 11697-11942 bp Feature: gene Location: 12136-12579 bp Feature: domain Description: Acetyltransf_7 Location: 12235-12475 bp Feature: domain Description: Acetyltransf_7 Location: 1223 5-12475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Acetyltransf_7 (pfam13508), CBD_II (smart00637), VWA (smart00327), Binary_toxB (pfam03495), DEDD_Tnp_IS110 (pfam01548), Transposase_20 (pfam02371)