myRT

myRT report for GCA_003469095.1_ASM346909v1

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Seq: QSKC01000027.1 [Eubacterium] rectale strain AM29-10 AM29-10.Scaf27, whole genome shotgun sequence (27640 bp)
Overview 1 RT 1: 11262-18175 bp Neighborhood of RT #1 [11262, 18175] Cas2_I_II_III RVT-CRISPR cas1_HMARI Feature: gene Location: 11262-15068 bp Feature: gene Location: 15123-15332 bp Feature: domain Description: Cas2_I_II_III Location: 15126-15309 bp Feature: domain Description: Cas2_I_II_III Location: 1 51 26-1 5309 bp Feature: gene Location: 15349-16050 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 15547-15889 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 5547-1 5889 bp Feature: gene Location: 16107-17042 bp Feature: domain Description: cas1_HMARI Location: 16110-17034 bp Feature: domain Description: cas1 _HMARI Location: 1 61 1 0-1 7034 bp Feature: gene Location: 17816-18175 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, cas1_HMARI (TIGR03641)

Seq: QSKC01000005.1 [Eubacterium] rectale strain AM29-10 AM29-10.Scaf5, whole genome shotgun sequence (174842 bp)
Overview 1 RT 1: 96996-103998 bp Neighborhood of RT #1 [96996, 104003] PRK12548 RVT-GII GIIM mycofact_OYE_2 LysR Feature: gene Location: 96996-97889 bp Feature: domain Description: PRK12548 Location: 97023-97884 bp Feature: domain Description: PRK12 548 Location: 9702 3-97884 bp Feature: gene Location: 98105-98347 bp Feature: gene Location: 98455-99849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98773-99397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98773-99397 bp Feature: domain Description: GIIM Note: maturase Location: 99454-99676 bp Feature: domain Description: GIIM Note: maturase Location: 99454-99676 bp Feature: gene Location: 99989-101989 bp Feature: domain Description: mycofact_OYE_2 Location: 100010-101957 bp Feature: domain Description: mycofact_OYE_2 Location: 100010-101957 bp Feature: gene Location: 103122-104003 bp Feature: domain Description: LysR Location: 103125-103998 bp Feature: domain Description: LysR Location: 10312 5-103998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12548 (shikimate dehydrogenase), RVT-GII, GIIM (pfam08388), mycofact_OYE_2 (TIGR03997), LysR (COG0583)